Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Slc1a6O35544 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Slc1a6O35544 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Slc1a6O35544 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.33■□□□□ 0.69
Slc1a6O35544 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Slc1a6O35544 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Slc1a6O35544 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Slc1a6O35544 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Slc1a6O35544 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Slc1a6O35544 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slc1a6O35544 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slc1a6O35544 Gm43530-201ENSMUST00000195920 274 ntBASIC19.32■□□□□ 0.68
Slc1a6O35544 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.32■□□□□ 0.68
Slc1a6O35544 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slc1a6O35544 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slc1a6O35544 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slc1a6O35544 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slc1a6O35544 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slc1a6O35544 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Slc1a6O35544 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slc1a6O35544 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slc1a6O35544 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Slc1a6O35544 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Slc1a6O35544 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slc1a6O35544 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Slc1a6O35544 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slc1a6O35544 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slc1a6O35544 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slc1a6O35544 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slc1a6O35544 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slc1a6O35544 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slc1a6O35544 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.3■□□□□ 0.68
Slc1a6O35544 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
Slc1a6O35544 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Slc1a6O35544 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slc1a6O35544 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.3■□□□□ 0.68
Slc1a6O35544 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slc1a6O35544 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
Slc1a6O35544 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Slc1a6O35544 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Slc1a6O35544 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Slc1a6O35544 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Slc1a6O35544 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.29■□□□□ 0.68
Slc1a6O35544 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Slc1a6O35544 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.29■□□□□ 0.68
Slc1a6O35544 Gm40881-201ENSMUST00000223397 166 ntBASIC19.29■□□□□ 0.68
Slc1a6O35544 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Slc1a6O35544 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Slc1a6O35544 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
Slc1a6O35544 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.29■□□□□ 0.68
Slc1a6O35544 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Slc1a6O35544 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Slc1a6O35544 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Slc1a6O35544 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Slc1a6O35544 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Slc1a6O35544 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Slc1a6O35544 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Slc1a6O35544 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Slc1a6O35544 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Slc1a6O35544 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Slc1a6O35544 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Slc1a6O35544 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Slc1a6O35544 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Slc1a6O35544 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
Slc1a6O35544 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Slc1a6O35544 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Slc1a6O35544 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Slc1a6O35544 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.27■□□□□ 0.68
Slc1a6O35544 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Slc1a6O35544 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Slc1a6O35544 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Slc1a6O35544 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Slc1a6O35544 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.26■□□□□ 0.67
Slc1a6O35544 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Slc1a6O35544 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Slc1a6O35544 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Slc1a6O35544 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Slc1a6O35544 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Slc1a6O35544 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.26■□□□□ 0.67
Slc1a6O35544 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Slc1a6O35544 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Slc1a6O35544 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Slc1a6O35544 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.25■□□□□ 0.67
Slc1a6O35544 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Slc1a6O35544 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Slc1a6O35544 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Slc1a6O35544 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.25■□□□□ 0.67
Slc1a6O35544 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.25■□□□□ 0.67
Slc1a6O35544 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Slc1a6O35544 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Slc1a6O35544 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Slc1a6O35544 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Slc1a6O35544 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Slc1a6O35544 Cap2-205ENSMUST00000225824 1634 ntBASIC19.25■□□□□ 0.67
Slc1a6O35544 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Slc1a6O35544 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Slc1a6O35544 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.24■□□□□ 0.67
Slc1a6O35544 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Slc1a6O35544 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.24■□□□□ 0.67
Slc1a6O35544 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms