Protein–RNA interactions for Protein: O35454

Clcn6, Chloride transport protein 6, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn6O35454 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Clcn6O35454 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Clcn6O35454 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Clcn6O35454 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Clcn6O35454 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Clcn6O35454 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Clcn6O35454 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Clcn6O35454 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Clcn6O35454 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.56■□□□□ 0.88
Clcn6O35454 Gm14363-201ENSMUST00000122304 409 ntBASIC20.56■□□□□ 0.88
Clcn6O35454 Gm44882-201ENSMUST00000205702 802 ntBASIC20.56■□□□□ 0.88
Clcn6O35454 Gm40881-201ENSMUST00000223397 166 ntBASIC20.56■□□□□ 0.88
Clcn6O35454 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Clcn6O35454 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Clcn6O35454 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Clcn6O35454 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Clcn6O35454 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Clcn6O35454 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clcn6O35454 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clcn6O35454 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clcn6O35454 Gm25509-201ENSMUST00000116985 106 ntBASIC20.55■□□□□ 0.88
Clcn6O35454 Gm12813-201ENSMUST00000119615 902 ntBASIC20.55■□□□□ 0.88
Clcn6O35454 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.55■□□□□ 0.88
Clcn6O35454 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Clcn6O35454 Gm45696-201ENSMUST00000212088 985 ntBASIC20.55■□□□□ 0.88
Clcn6O35454 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Clcn6O35454 Gm17872-201ENSMUST00000222550 532 ntBASIC20.55■□□□□ 0.88
Clcn6O35454 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Clcn6O35454 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clcn6O35454 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Clcn6O35454 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clcn6O35454 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
Clcn6O35454 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Clcn6O35454 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Clcn6O35454 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.54■□□□□ 0.88
Clcn6O35454 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC20.54■□□□□ 0.88
Clcn6O35454 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Clcn6O35454 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Clcn6O35454 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Clcn6O35454 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Clcn6O35454 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Clcn6O35454 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Clcn6O35454 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
Clcn6O35454 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Clcn6O35454 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Clcn6O35454 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Clcn6O35454 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Clcn6O35454 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
Clcn6O35454 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Clcn6O35454 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.53■□□□□ 0.88
Clcn6O35454 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Clcn6O35454 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Clcn6O35454 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Clcn6O35454 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Clcn6O35454 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Clcn6O35454 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Clcn6O35454 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Clcn6O35454 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.52■□□□□ 0.88
Clcn6O35454 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Clcn6O35454 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Clcn6O35454 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Clcn6O35454 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Clcn6O35454 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Clcn6O35454 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.52■□□□□ 0.88
Clcn6O35454 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.52■□□□□ 0.88
Clcn6O35454 Golph3-205ENSMUST00000228671 2842 ntBASIC20.52■□□□□ 0.88
Clcn6O35454 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Clcn6O35454 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
Clcn6O35454 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC20.51■□□□□ 0.87
Clcn6O35454 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.51■□□□□ 0.87
Clcn6O35454 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.51■□□□□ 0.87
Clcn6O35454 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Clcn6O35454 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Clcn6O35454 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.51■□□□□ 0.87
Clcn6O35454 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Clcn6O35454 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Clcn6O35454 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Clcn6O35454 Gm37641-201ENSMUST00000193837 239 ntBASIC20.5■□□□□ 0.87
Clcn6O35454 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.5■□□□□ 0.87
Clcn6O35454 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.5■□□□□ 0.87
Clcn6O35454 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.5■□□□□ 0.87
Clcn6O35454 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Clcn6O35454 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Clcn6O35454 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Clcn6O35454 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.49■□□□□ 0.87
Clcn6O35454 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Clcn6O35454 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Clcn6O35454 Gm13263-201ENSMUST00000121271 838 ntBASIC20.49■□□□□ 0.87
Clcn6O35454 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.49■□□□□ 0.87
Clcn6O35454 AC154248.2-201ENSMUST00000221964 659 ntTSL 5 BASIC20.49■□□□□ 0.87
Clcn6O35454 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Clcn6O35454 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Clcn6O35454 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
Clcn6O35454 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Clcn6O35454 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Clcn6O35454 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Clcn6O35454 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.48■□□□□ 0.87
Clcn6O35454 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Clcn6O35454 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Clcn6O35454 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms