Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfsf11O35235 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC15.28■□□□□ 0.04
Tnfsf11O35235 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC15.28■□□□□ 0.04
Tnfsf11O35235 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfsf11O35235 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Tnfsf11O35235 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
Tnfsf11O35235 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfsf11O35235 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfsf11O35235 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tnfsf11O35235 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Tnfsf11O35235 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tnfsf11O35235 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Tnfsf11O35235 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tnfsf11O35235 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC15.27■□□□□ 0.04
Tnfsf11O35235 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tnfsf11O35235 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tnfsf11O35235 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tnfsf11O35235 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tnfsf11O35235 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Tnfsf11O35235 Gm10420-201ENSMUST00000121713 882 ntBASIC15.27■□□□□ 0.04
Tnfsf11O35235 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tnfsf11O35235 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tnfsf11O35235 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tnfsf11O35235 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
Tnfsf11O35235 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Tnfsf11O35235 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tnfsf11O35235 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfsf11O35235 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfsf11O35235 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfsf11O35235 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC15.26■□□□□ 0.03
Tnfsf11O35235 Rarb-207ENSMUST00000225921 2756 ntBASIC15.26■□□□□ 0.03
Tnfsf11O35235 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Tnfsf11O35235 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Tnfsf11O35235 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfsf11O35235 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfsf11O35235 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfsf11O35235 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfsf11O35235 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfsf11O35235 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfsf11O35235 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfsf11O35235 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfsf11O35235 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Tnfsf11O35235 AC166356.1-201ENSMUST00000228236 1426 ntBASIC15.26■□□□□ 0.03
Tnfsf11O35235 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tnfsf11O35235 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Tnfsf11O35235 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Tnfsf11O35235 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Tnfsf11O35235 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tnfsf11O35235 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tnfsf11O35235 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Tnfsf11O35235 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tnfsf11O35235 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC15.25■□□□□ 0.03
Tnfsf11O35235 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tnfsf11O35235 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tnfsf11O35235 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tnfsf11O35235 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tnfsf11O35235 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tnfsf11O35235 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
Tnfsf11O35235 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
Tnfsf11O35235 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tnfsf11O35235 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC15.24■□□□□ 0.03
Tnfsf11O35235 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Tnfsf11O35235 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Tnfsf11O35235 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Tnfsf11O35235 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tnfsf11O35235 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tnfsf11O35235 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tnfsf11O35235 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tnfsf11O35235 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tnfsf11O35235 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tnfsf11O35235 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Tnfsf11O35235 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Tnfsf11O35235 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC15.23■□□□□ 0.03
Tnfsf11O35235 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tnfsf11O35235 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Tnfsf11O35235 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tnfsf11O35235 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Tnfsf11O35235 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC15.23■□□□□ 0.03
Tnfsf11O35235 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC15.23■□□□□ 0.03
Tnfsf11O35235 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Tnfsf11O35235 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Tnfsf11O35235 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Tnfsf11O35235 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Tnfsf11O35235 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tnfsf11O35235 Gm6802-201ENSMUST00000167843 1983 ntBASIC15.23■□□□□ 0.03
Tnfsf11O35235 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Tnfsf11O35235 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC15.23■□□□□ 0.03
Tnfsf11O35235 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tnfsf11O35235 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tnfsf11O35235 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Tnfsf11O35235 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
Tnfsf11O35235 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tnfsf11O35235 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Tnfsf11O35235 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tnfsf11O35235 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC15.22■□□□□ 0.03
Tnfsf11O35235 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tnfsf11O35235 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tnfsf11O35235 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC15.22■□□□□ 0.03
Tnfsf11O35235 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Tnfsf11O35235 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms