Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trove2O08848 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trove2O08848 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.03■□□□□ 0.8
Trove2O08848 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trove2O08848 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trove2O08848 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.03■□□□□ 0.8
Trove2O08848 Gm5812-201ENSMUST00000061073 957 ntBASIC20.03■□□□□ 0.8
Trove2O08848 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trove2O08848 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Trove2O08848 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.03■□□□□ 0.8
Trove2O08848 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trove2O08848 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trove2O08848 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trove2O08848 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trove2O08848 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trove2O08848 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.02■□□□□ 0.8
Trove2O08848 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trove2O08848 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Trove2O08848 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
Trove2O08848 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Trove2O08848 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Trove2O08848 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Trove2O08848 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trove2O08848 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Trove2O08848 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trove2O08848 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Trove2O08848 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Trove2O08848 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trove2O08848 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trove2O08848 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trove2O08848 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Trove2O08848 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trove2O08848 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20■□□□□ 0.79
Trove2O08848 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20■□□□□ 0.79
Trove2O08848 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20■□□□□ 0.79
Trove2O08848 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Trove2O08848 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Trove2O08848 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trove2O08848 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Trove2O08848 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Trove2O08848 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trove2O08848 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Trove2O08848 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trove2O08848 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Trove2O08848 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trove2O08848 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Trove2O08848 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trove2O08848 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trove2O08848 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trove2O08848 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trove2O08848 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trove2O08848 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.98■□□□□ 0.79
Trove2O08848 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
Trove2O08848 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trove2O08848 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.98■□□□□ 0.79
Trove2O08848 Gm15546-201ENSMUST00000122095 826 ntBASIC19.98■□□□□ 0.79
Trove2O08848 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.98■□□□□ 0.79
Trove2O08848 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.98■□□□□ 0.79
Trove2O08848 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trove2O08848 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trove2O08848 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Trove2O08848 Gm40881-201ENSMUST00000223397 166 ntBASIC19.97■□□□□ 0.79
Trove2O08848 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trove2O08848 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Trove2O08848 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trove2O08848 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trove2O08848 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
Trove2O08848 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trove2O08848 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trove2O08848 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Trove2O08848 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trove2O08848 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trove2O08848 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trove2O08848 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.96■□□□□ 0.79
Trove2O08848 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Trove2O08848 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.96■□□□□ 0.79
Trove2O08848 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.96■□□□□ 0.79
Trove2O08848 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trove2O08848 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trove2O08848 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trove2O08848 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trove2O08848 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trove2O08848 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Trove2O08848 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trove2O08848 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Trove2O08848 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trove2O08848 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Trove2O08848 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trove2O08848 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trove2O08848 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.95■□□□□ 0.78
Trove2O08848 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trove2O08848 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trove2O08848 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Trove2O08848 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trove2O08848 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trove2O08848 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trove2O08848 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trove2O08848 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trove2O08848 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.94■□□□□ 0.78
Trove2O08848 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.94■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms