Protein–RNA interactions for Protein: L7N2D9

Gm3239, Predicted gene 3239, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3239L7N2D9 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Gm3239L7N2D9 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Gm3239L7N2D9 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm3239L7N2D9 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm3239L7N2D9 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
Gm3239L7N2D9 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.58■□□□□ 0.57
Gm3239L7N2D9 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Gm3239L7N2D9 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Gm3239L7N2D9 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gm3239L7N2D9 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Gm3239L7N2D9 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC18.58■□□□□ 0.56
Gm3239L7N2D9 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC18.58■□□□□ 0.56
Gm3239L7N2D9 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC18.58■□□□□ 0.56
Gm3239L7N2D9 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Gm3239L7N2D9 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.56
Gm3239L7N2D9 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gm3239L7N2D9 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gm3239L7N2D9 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm3239L7N2D9 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm3239L7N2D9 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm3239L7N2D9 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.57■□□□□ 0.56
Gm3239L7N2D9 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm3239L7N2D9 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Gm3239L7N2D9 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm3239L7N2D9 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm3239L7N2D9 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.56■□□□□ 0.56
Gm3239L7N2D9 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm3239L7N2D9 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm3239L7N2D9 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm3239L7N2D9 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm3239L7N2D9 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm3239L7N2D9 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Gm3239L7N2D9 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm3239L7N2D9 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm3239L7N2D9 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Gm3239L7N2D9 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm3239L7N2D9 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Gm3239L7N2D9 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm3239L7N2D9 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Gm3239L7N2D9 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm3239L7N2D9 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm3239L7N2D9 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Gm3239L7N2D9 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Gm3239L7N2D9 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Gm3239L7N2D9 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.55■□□□□ 0.56
Gm3239L7N2D9 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm3239L7N2D9 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm3239L7N2D9 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.55■□□□□ 0.56
Gm3239L7N2D9 Gm40881-201ENSMUST00000223397 166 ntBASIC18.55■□□□□ 0.56
Gm3239L7N2D9 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Gm3239L7N2D9 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Gm3239L7N2D9 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm3239L7N2D9 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm3239L7N2D9 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm3239L7N2D9 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm3239L7N2D9 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm3239L7N2D9 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm3239L7N2D9 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm3239L7N2D9 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
Gm3239L7N2D9 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm3239L7N2D9 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm3239L7N2D9 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm3239L7N2D9 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm3239L7N2D9 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm3239L7N2D9 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm3239L7N2D9 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Gm3239L7N2D9 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC18.54■□□□□ 0.56
Gm3239L7N2D9 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Gm3239L7N2D9 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm3239L7N2D9 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Gm3239L7N2D9 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm3239L7N2D9 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Gm3239L7N2D9 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.54■□□□□ 0.56
Gm3239L7N2D9 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Gm3239L7N2D9 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm3239L7N2D9 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm3239L7N2D9 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm3239L7N2D9 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.53■□□□□ 0.56
Gm3239L7N2D9 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Gm3239L7N2D9 Gm15820-201ENSMUST00000201566 728 ntBASIC18.53■□□□□ 0.56
Gm3239L7N2D9 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm3239L7N2D9 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
Gm3239L7N2D9 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Gm3239L7N2D9 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm3239L7N2D9 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Gm3239L7N2D9 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Gm3239L7N2D9 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gm3239L7N2D9 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gm3239L7N2D9 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Gm3239L7N2D9 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Gm3239L7N2D9 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gm3239L7N2D9 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Gm3239L7N2D9 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Gm3239L7N2D9 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.52■□□□□ 0.55
Gm3239L7N2D9 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Gm3239L7N2D9 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gm3239L7N2D9 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.51■□□□□ 0.55
Gm3239L7N2D9 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gm3239L7N2D9 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Gm3239L7N2D9 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms