Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC17.29■□□□□ 0.36
Trav13d-3J3QMG8 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
Trav13d-3J3QMG8 Gm5576-201ENSMUST00000075809 1236 ntBASIC17.29■□□□□ 0.36
Trav13d-3J3QMG8 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.29■□□□□ 0.36
Trav13d-3J3QMG8 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav13d-3J3QMG8 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav13d-3J3QMG8 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
Trav13d-3J3QMG8 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav13d-3J3QMG8 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
Trav13d-3J3QMG8 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Trav13d-3J3QMG8 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav13d-3J3QMG8 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trav13d-3J3QMG8 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Trav13d-3J3QMG8 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav13d-3J3QMG8 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Trav13d-3J3QMG8 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav13d-3J3QMG8 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trav13d-3J3QMG8 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav13d-3J3QMG8 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
Trav13d-3J3QMG8 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.28■□□□□ 0.36
Trav13d-3J3QMG8 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav13d-3J3QMG8 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav13d-3J3QMG8 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav13d-3J3QMG8 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
Trav13d-3J3QMG8 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav13d-3J3QMG8 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trav13d-3J3QMG8 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trav13d-3J3QMG8 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC17.27■□□□□ 0.36
Trav13d-3J3QMG8 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trav13d-3J3QMG8 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.27■□□□□ 0.35
Trav13d-3J3QMG8 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trav13d-3J3QMG8 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trav13d-3J3QMG8 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Trav13d-3J3QMG8 Golph3-202ENSMUST00000226517 2359 ntBASIC17.26■□□□□ 0.35
Trav13d-3J3QMG8 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav13d-3J3QMG8 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav13d-3J3QMG8 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav13d-3J3QMG8 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav13d-3J3QMG8 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trav13d-3J3QMG8 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav13d-3J3QMG8 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Trav13d-3J3QMG8 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav13d-3J3QMG8 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav13d-3J3QMG8 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav13d-3J3QMG8 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav13d-3J3QMG8 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav13d-3J3QMG8 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav13d-3J3QMG8 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav13d-3J3QMG8 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav13d-3J3QMG8 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
Trav13d-3J3QMG8 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Trav13d-3J3QMG8 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav13d-3J3QMG8 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav13d-3J3QMG8 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Trav13d-3J3QMG8 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Trav13d-3J3QMG8 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav13d-3J3QMG8 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
Trav13d-3J3QMG8 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav13d-3J3QMG8 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav13d-3J3QMG8 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav13d-3J3QMG8 AA386476-201ENSMUST00000098781 1665 ntBASIC17.25■□□□□ 0.35
Trav13d-3J3QMG8 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trav13d-3J3QMG8 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav13d-3J3QMG8 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav13d-3J3QMG8 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trav13d-3J3QMG8 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav13d-3J3QMG8 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav13d-3J3QMG8 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
Trav13d-3J3QMG8 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav13d-3J3QMG8 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Trav13d-3J3QMG8 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC17.24■□□□□ 0.35
Trav13d-3J3QMG8 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trav13d-3J3QMG8 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trav13d-3J3QMG8 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav13d-3J3QMG8 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.24■□□□□ 0.35
Trav13d-3J3QMG8 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav13d-3J3QMG8 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav13d-3J3QMG8 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.24■□□□□ 0.35
Trav13d-3J3QMG8 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav13d-3J3QMG8 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav13d-3J3QMG8 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav13d-3J3QMG8 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav13d-3J3QMG8 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav13d-3J3QMG8 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav13d-3J3QMG8 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC17.23■□□□□ 0.35
Trav13d-3J3QMG8 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC17.23■□□□□ 0.35
Trav13d-3J3QMG8 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC17.23■□□□□ 0.35
Trav13d-3J3QMG8 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Trav13d-3J3QMG8 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Trav13d-3J3QMG8 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
Trav13d-3J3QMG8 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav13d-3J3QMG8 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
Trav13d-3J3QMG8 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav13d-3J3QMG8 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav13d-3J3QMG8 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC17.22■□□□□ 0.35
Trav13d-3J3QMG8 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav13d-3J3QMG8 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trav13d-3J3QMG8 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav13d-3J3QMG8 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trav13d-3J3QMG8 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms