Protein–RNA interactions for Protein: F6V035

Ccdc149, Coiled-coil domain-containing 149, mousemouse

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc149F6V035 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ccdc149F6V035 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Ccdc149F6V035 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ccdc149F6V035 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Ccdc149F6V035 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Ccdc149F6V035 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc149F6V035 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc149F6V035 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc149F6V035 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc149F6V035 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc149F6V035 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc149F6V035 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc149F6V035 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc149F6V035 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc149F6V035 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Ccdc149F6V035 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc149F6V035 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc149F6V035 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc149F6V035 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc149F6V035 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.96■□□□□ 0.79
Ccdc149F6V035 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc149F6V035 Gm13234-201ENSMUST00000120010 747 ntBASIC19.96■□□□□ 0.79
Ccdc149F6V035 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc149F6V035 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC19.96■□□□□ 0.79
Ccdc149F6V035 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.96■□□□□ 0.79
Ccdc149F6V035 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC19.96■□□□□ 0.79
Ccdc149F6V035 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc149F6V035 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc149F6V035 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc149F6V035 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc149F6V035 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Ccdc149F6V035 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Ccdc149F6V035 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc149F6V035 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Ccdc149F6V035 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC19.95■□□□□ 0.78
Ccdc149F6V035 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc149F6V035 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc149F6V035 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc149F6V035 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc149F6V035 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc149F6V035 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc149F6V035 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Ccdc149F6V035 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
Ccdc149F6V035 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc149F6V035 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc149F6V035 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
Ccdc149F6V035 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc149F6V035 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc149F6V035 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc149F6V035 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.94■□□□□ 0.78
Ccdc149F6V035 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc149F6V035 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc149F6V035 Reep4-203ENSMUST00000226563 1444 ntBASIC19.93■□□□□ 0.78
Ccdc149F6V035 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc149F6V035 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc149F6V035 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc149F6V035 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.93■□□□□ 0.78
Ccdc149F6V035 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc149F6V035 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc149F6V035 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc149F6V035 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Ccdc149F6V035 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Ccdc149F6V035 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.92■□□□□ 0.78
Ccdc149F6V035 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.92■□□□□ 0.78
Ccdc149F6V035 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc149F6V035 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc149F6V035 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc149F6V035 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc149F6V035 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc149F6V035 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc149F6V035 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc149F6V035 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc149F6V035 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc149F6V035 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc149F6V035 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC19.91■□□□□ 0.78
Ccdc149F6V035 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19.91■□□□□ 0.78
Ccdc149F6V035 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc149F6V035 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc149F6V035 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc149F6V035 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc149F6V035 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc149F6V035 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc149F6V035 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc149F6V035 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc149F6V035 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.9■□□□□ 0.78
Ccdc149F6V035 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Ccdc149F6V035 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc149F6V035 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc149F6V035 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc149F6V035 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc149F6V035 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc149F6V035 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Ccdc149F6V035 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Ccdc149F6V035 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.89■□□□□ 0.77
Ccdc149F6V035 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.89■□□□□ 0.77
Ccdc149F6V035 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc149F6V035 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc149F6V035 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc149F6V035 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc149F6V035 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms