Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Col6a3E9PWQ3 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.13■□□□□ 0.81
Col6a3E9PWQ3 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Col6a3E9PWQ3 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Col6a3E9PWQ3 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Col6a3E9PWQ3 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
Col6a3E9PWQ3 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Col6a3E9PWQ3 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Col6a3E9PWQ3 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Col6a3E9PWQ3 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Col6a3E9PWQ3 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC20.12■□□□□ 0.81
Col6a3E9PWQ3 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
Col6a3E9PWQ3 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Col6a3E9PWQ3 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.12■□□□□ 0.81
Col6a3E9PWQ3 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC20.12■□□□□ 0.81
Col6a3E9PWQ3 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Col6a3E9PWQ3 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Col6a3E9PWQ3 Gm8668-201ENSMUST00000120559 1447 ntBASIC20.11■□□□□ 0.81
Col6a3E9PWQ3 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Col6a3E9PWQ3 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Col6a3E9PWQ3 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Col6a3E9PWQ3 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Col6a3E9PWQ3 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Col6a3E9PWQ3 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Col6a3E9PWQ3 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Col6a3E9PWQ3 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Col6a3E9PWQ3 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC20.1■□□□□ 0.81
Col6a3E9PWQ3 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC20.1■□□□□ 0.81
Col6a3E9PWQ3 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Col6a3E9PWQ3 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Col6a3E9PWQ3 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Col6a3E9PWQ3 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Col6a3E9PWQ3 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Col6a3E9PWQ3 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Col6a3E9PWQ3 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Col6a3E9PWQ3 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Col6a3E9PWQ3 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Col6a3E9PWQ3 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Col6a3E9PWQ3 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Col6a3E9PWQ3 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Col6a3E9PWQ3 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Col6a3E9PWQ3 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Col6a3E9PWQ3 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC20.09■□□□□ 0.81
Col6a3E9PWQ3 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Col6a3E9PWQ3 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC20.09■□□□□ 0.81
Col6a3E9PWQ3 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Col6a3E9PWQ3 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Col6a3E9PWQ3 Ank2-226ENSMUST00000189368 339 ntBASIC20.08■□□□□ 0.81
Col6a3E9PWQ3 Rab3c-203ENSMUST00000224180 967 ntBASIC20.08■□□□□ 0.81
Col6a3E9PWQ3 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Col6a3E9PWQ3 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Col6a3E9PWQ3 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC20.08■□□□□ 0.8
Col6a3E9PWQ3 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.8
Col6a3E9PWQ3 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
Col6a3E9PWQ3 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Col6a3E9PWQ3 AC133598.3-202ENSMUST00000224219 531 ntBASIC20.07■□□□□ 0.8
Col6a3E9PWQ3 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Col6a3E9PWQ3 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.07■□□□□ 0.8
Col6a3E9PWQ3 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Col6a3E9PWQ3 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Col6a3E9PWQ3 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Col6a3E9PWQ3 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Col6a3E9PWQ3 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Col6a3E9PWQ3 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Col6a3E9PWQ3 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC20.06■□□□□ 0.8
Col6a3E9PWQ3 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Col6a3E9PWQ3 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Col6a3E9PWQ3 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Col6a3E9PWQ3 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Col6a3E9PWQ3 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC20.05■□□□□ 0.8
Col6a3E9PWQ3 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Col6a3E9PWQ3 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Col6a3E9PWQ3 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Col6a3E9PWQ3 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Col6a3E9PWQ3 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Col6a3E9PWQ3 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col6a3E9PWQ3 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col6a3E9PWQ3 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col6a3E9PWQ3 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col6a3E9PWQ3 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Col6a3E9PWQ3 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Col6a3E9PWQ3 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col6a3E9PWQ3 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col6a3E9PWQ3 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC20.03■□□□□ 0.8
Col6a3E9PWQ3 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col6a3E9PWQ3 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col6a3E9PWQ3 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.03■□□□□ 0.8
Col6a3E9PWQ3 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col6a3E9PWQ3 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Col6a3E9PWQ3 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC20.03■□□□□ 0.8
Col6a3E9PWQ3 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col6a3E9PWQ3 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col6a3E9PWQ3 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC20.03■□□□□ 0.8
Col6a3E9PWQ3 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Col6a3E9PWQ3 Gm9103-201ENSMUST00000119371 405 ntBASIC20.02■□□□□ 0.8
Col6a3E9PWQ3 Gm13534-201ENSMUST00000121169 513 ntBASIC20.02■□□□□ 0.8
Col6a3E9PWQ3 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Col6a3E9PWQ3 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Col6a3E9PWQ3 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col6a3E9PWQ3 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms