Protein–RNA interactions for Protein: A2RT60

Htra4, Serine protease HTRA4, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Htra4A2RT60 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Htra4A2RT60 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Htra4A2RT60 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC17.32■□□□□ 0.36
Htra4A2RT60 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Htra4A2RT60 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC17.31■□□□□ 0.36
Htra4A2RT60 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.31■□□□□ 0.36
Htra4A2RT60 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Htra4A2RT60 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Htra4A2RT60 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Htra4A2RT60 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Htra4A2RT60 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Htra4A2RT60 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Htra4A2RT60 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Htra4A2RT60 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Htra4A2RT60 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Htra4A2RT60 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Htra4A2RT60 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Htra4A2RT60 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Htra4A2RT60 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
Htra4A2RT60 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Htra4A2RT60 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC17.3■□□□□ 0.36
Htra4A2RT60 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Htra4A2RT60 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC17.3■□□□□ 0.36
Htra4A2RT60 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Htra4A2RT60 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Htra4A2RT60 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC17.3■□□□□ 0.36
Htra4A2RT60 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.3■□□□□ 0.36
Htra4A2RT60 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Htra4A2RT60 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Htra4A2RT60 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Htra4A2RT60 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Htra4A2RT60 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Htra4A2RT60 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Htra4A2RT60 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Htra4A2RT60 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Htra4A2RT60 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Htra4A2RT60 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Htra4A2RT60 Krt8-ps-201ENSMUST00000208495 945 ntBASIC17.29■□□□□ 0.36
Htra4A2RT60 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Htra4A2RT60 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Htra4A2RT60 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Htra4A2RT60 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Htra4A2RT60 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC17.28■□□□□ 0.36
Htra4A2RT60 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Htra4A2RT60 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Htra4A2RT60 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Htra4A2RT60 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Htra4A2RT60 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Htra4A2RT60 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC17.28■□□□□ 0.36
Htra4A2RT60 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Htra4A2RT60 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Htra4A2RT60 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC17.28■□□□□ 0.36
Htra4A2RT60 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Htra4A2RT60 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.28■□□□□ 0.36
Htra4A2RT60 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Htra4A2RT60 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Htra4A2RT60 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Htra4A2RT60 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Htra4A2RT60 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Htra4A2RT60 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC17.27■□□□□ 0.36
Htra4A2RT60 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Htra4A2RT60 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Htra4A2RT60 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Htra4A2RT60 Gm8770-201ENSMUST00000121113 1109 ntBASIC17.27■□□□□ 0.36
Htra4A2RT60 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC17.27■□□□□ 0.36
Htra4A2RT60 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC17.27■□□□□ 0.36
Htra4A2RT60 Serp2-204ENSMUST00000228055 705 ntBASIC17.27■□□□□ 0.36
Htra4A2RT60 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Htra4A2RT60 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Htra4A2RT60 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.27■□□□□ 0.35
Htra4A2RT60 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Htra4A2RT60 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Htra4A2RT60 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Htra4A2RT60 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Htra4A2RT60 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.26■□□□□ 0.35
Htra4A2RT60 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Htra4A2RT60 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Htra4A2RT60 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Htra4A2RT60 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
Htra4A2RT60 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Htra4A2RT60 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
Htra4A2RT60 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Htra4A2RT60 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Htra4A2RT60 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Htra4A2RT60 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Htra4A2RT60 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Htra4A2RT60 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC17.25■□□□□ 0.35
Htra4A2RT60 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Htra4A2RT60 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Htra4A2RT60 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Htra4A2RT60 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Htra4A2RT60 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC17.25■□□□□ 0.35
Htra4A2RT60 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.25■□□□□ 0.35
Htra4A2RT60 Gm43530-201ENSMUST00000195920 274 ntBASIC17.25■□□□□ 0.35
Htra4A2RT60 Gm43137-201ENSMUST00000198052 594 ntBASIC17.25■□□□□ 0.35
Htra4A2RT60 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Htra4A2RT60 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Htra4A2RT60 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Htra4A2RT60 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Htra4A2RT60 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms