Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav12d-1A0N8R0 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav12d-1A0N8R0 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
Trav12d-1A0N8R0 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav12d-1A0N8R0 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Trav12d-1A0N8R0 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav12d-1A0N8R0 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav12d-1A0N8R0 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav12d-1A0N8R0 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC15.77■□□□□ 0.12
Trav12d-1A0N8R0 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav12d-1A0N8R0 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav12d-1A0N8R0 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Trav12d-1A0N8R0 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav12d-1A0N8R0 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav12d-1A0N8R0 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC15.76■□□□□ 0.11
Trav12d-1A0N8R0 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav12d-1A0N8R0 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav12d-1A0N8R0 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav12d-1A0N8R0 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav12d-1A0N8R0 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav12d-1A0N8R0 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Trav12d-1A0N8R0 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC15.76■□□□□ 0.11
Trav12d-1A0N8R0 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav12d-1A0N8R0 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav12d-1A0N8R0 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav12d-1A0N8R0 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Trav12d-1A0N8R0 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Trav12d-1A0N8R0 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trav12d-1A0N8R0 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav12d-1A0N8R0 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav12d-1A0N8R0 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav12d-1A0N8R0 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Trav12d-1A0N8R0 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Trav12d-1A0N8R0 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav12d-1A0N8R0 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trav12d-1A0N8R0 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC15.75■□□□□ 0.11
Trav12d-1A0N8R0 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav12d-1A0N8R0 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav12d-1A0N8R0 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav12d-1A0N8R0 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav12d-1A0N8R0 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC15.75■□□□□ 0.11
Trav12d-1A0N8R0 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav12d-1A0N8R0 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC15.75■□□□□ 0.11
Trav12d-1A0N8R0 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav12d-1A0N8R0 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav12d-1A0N8R0 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav12d-1A0N8R0 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav12d-1A0N8R0 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Trav12d-1A0N8R0 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trav12d-1A0N8R0 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trav12d-1A0N8R0 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Trav12d-1A0N8R0 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Trav12d-1A0N8R0 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav12d-1A0N8R0 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav12d-1A0N8R0 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav12d-1A0N8R0 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Trav12d-1A0N8R0 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Trav12d-1A0N8R0 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav12d-1A0N8R0 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav12d-1A0N8R0 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
Trav12d-1A0N8R0 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav12d-1A0N8R0 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav12d-1A0N8R0 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav12d-1A0N8R0 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav12d-1A0N8R0 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav12d-1A0N8R0 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trav12d-1A0N8R0 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav12d-1A0N8R0 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Trav12d-1A0N8R0 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Trav12d-1A0N8R0 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav12d-1A0N8R0 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Trav12d-1A0N8R0 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav12d-1A0N8R0 AC126028.2-201ENSMUST00000228100 1833 ntBASIC15.73■□□□□ 0.11
Trav12d-1A0N8R0 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav12d-1A0N8R0 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav12d-1A0N8R0 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav12d-1A0N8R0 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC15.72■□□□□ 0.11
Trav12d-1A0N8R0 Gm5784-201ENSMUST00000179344 2478 ntBASIC15.72■□□□□ 0.11
Trav12d-1A0N8R0 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav12d-1A0N8R0 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav12d-1A0N8R0 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC15.72■□□□□ 0.11
Trav12d-1A0N8R0 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Trav12d-1A0N8R0 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav12d-1A0N8R0 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav12d-1A0N8R0 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav12d-1A0N8R0 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav12d-1A0N8R0 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC15.72■□□□□ 0.11
Trav12d-1A0N8R0 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC15.72■□□□□ 0.11
Trav12d-1A0N8R0 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav12d-1A0N8R0 Gm9870-201ENSMUST00000063874 645 ntBASIC15.72■□□□□ 0.11
Trav12d-1A0N8R0 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav12d-1A0N8R0 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Trav12d-1A0N8R0 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav12d-1A0N8R0 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Trav12d-1A0N8R0 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav12d-1A0N8R0 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav12d-1A0N8R0 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav12d-1A0N8R0 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav12d-1A0N8R0 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
Trav12d-1A0N8R0 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms