Protein–RNA interactions for Protein: A0A1B0GSS6

Gm3854, Predicted gene 3854, mousemouse

Predictions only

Length 495 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3854A0A1B0GSS6 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gm3854A0A1B0GSS6 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Gm3854A0A1B0GSS6 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Gm3854A0A1B0GSS6 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gm3854A0A1B0GSS6 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.72■□□□□ 0.75
Gm3854A0A1B0GSS6 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gm3854A0A1B0GSS6 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.72■□□□□ 0.75
Gm3854A0A1B0GSS6 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.72■□□□□ 0.75
Gm3854A0A1B0GSS6 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gm3854A0A1B0GSS6 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Gm3854A0A1B0GSS6 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gm3854A0A1B0GSS6 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gm3854A0A1B0GSS6 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.71■□□□□ 0.75
Gm3854A0A1B0GSS6 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm3854A0A1B0GSS6 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Gm3854A0A1B0GSS6 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.71■□□□□ 0.75
Gm3854A0A1B0GSS6 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.71■□□□□ 0.75
Gm3854A0A1B0GSS6 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
Gm3854A0A1B0GSS6 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Gm3854A0A1B0GSS6 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm3854A0A1B0GSS6 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm3854A0A1B0GSS6 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Gm3854A0A1B0GSS6 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm3854A0A1B0GSS6 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm3854A0A1B0GSS6 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Gm3854A0A1B0GSS6 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gm3854A0A1B0GSS6 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gm3854A0A1B0GSS6 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gm3854A0A1B0GSS6 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Gm3854A0A1B0GSS6 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gm3854A0A1B0GSS6 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gm3854A0A1B0GSS6 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Gm3854A0A1B0GSS6 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gm3854A0A1B0GSS6 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gm3854A0A1B0GSS6 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Gm3854A0A1B0GSS6 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Gm3854A0A1B0GSS6 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gm3854A0A1B0GSS6 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gm3854A0A1B0GSS6 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.69■□□□□ 0.74
Gm3854A0A1B0GSS6 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gm3854A0A1B0GSS6 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Gm3854A0A1B0GSS6 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gm3854A0A1B0GSS6 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Gm3854A0A1B0GSS6 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Gm3854A0A1B0GSS6 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gm3854A0A1B0GSS6 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.68■□□□□ 0.74
Gm3854A0A1B0GSS6 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Gm3854A0A1B0GSS6 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.68■□□□□ 0.74
Gm3854A0A1B0GSS6 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gm3854A0A1B0GSS6 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Gm3854A0A1B0GSS6 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gm3854A0A1B0GSS6 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Gm3854A0A1B0GSS6 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Gm3854A0A1B0GSS6 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gm3854A0A1B0GSS6 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gm3854A0A1B0GSS6 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.67■□□□□ 0.74
Gm3854A0A1B0GSS6 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gm3854A0A1B0GSS6 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gm3854A0A1B0GSS6 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gm3854A0A1B0GSS6 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gm3854A0A1B0GSS6 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gm3854A0A1B0GSS6 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gm3854A0A1B0GSS6 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gm3854A0A1B0GSS6 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
Gm3854A0A1B0GSS6 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gm3854A0A1B0GSS6 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gm3854A0A1B0GSS6 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gm3854A0A1B0GSS6 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Gm3854A0A1B0GSS6 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.66■□□□□ 0.74
Gm3854A0A1B0GSS6 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gm3854A0A1B0GSS6 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.66■□□□□ 0.74
Gm3854A0A1B0GSS6 Mir5133-201ENSMUST00000174955 77 ntBASIC19.66■□□□□ 0.74
Gm3854A0A1B0GSS6 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
Gm3854A0A1B0GSS6 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Gm3854A0A1B0GSS6 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Gm3854A0A1B0GSS6 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gm3854A0A1B0GSS6 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Gm3854A0A1B0GSS6 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
Gm3854A0A1B0GSS6 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gm3854A0A1B0GSS6 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC19.65■□□□□ 0.74
Gm3854A0A1B0GSS6 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC19.65■□□□□ 0.74
Gm3854A0A1B0GSS6 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gm3854A0A1B0GSS6 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gm3854A0A1B0GSS6 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Gm3854A0A1B0GSS6 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
Gm3854A0A1B0GSS6 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Gm3854A0A1B0GSS6 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC19.64■□□□□ 0.73
Gm3854A0A1B0GSS6 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.64■□□□□ 0.73
Gm3854A0A1B0GSS6 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.64■□□□□ 0.73
Gm3854A0A1B0GSS6 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gm3854A0A1B0GSS6 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Gm3854A0A1B0GSS6 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Gm3854A0A1B0GSS6 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gm3854A0A1B0GSS6 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Gm3854A0A1B0GSS6 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gm3854A0A1B0GSS6 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Gm3854A0A1B0GSS6 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.64■□□□□ 0.73
Gm3854A0A1B0GSS6 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gm3854A0A1B0GSS6 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Gm3854A0A1B0GSS6 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.64■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms