Protein–RNA interactions for Protein: A0A140T8N6

Trbv13-2, T cell receptor beta, variable 13-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-2A0A140T8N6 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trbv13-2A0A140T8N6 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
Trbv13-2A0A140T8N6 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trbv13-2A0A140T8N6 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv13-2A0A140T8N6 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv13-2A0A140T8N6 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv13-2A0A140T8N6 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv13-2A0A140T8N6 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv13-2A0A140T8N6 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Trbv13-2A0A140T8N6 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv13-2A0A140T8N6 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv13-2A0A140T8N6 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv13-2A0A140T8N6 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv13-2A0A140T8N6 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv13-2A0A140T8N6 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC13.64□□□□□ -0.23
Trbv13-2A0A140T8N6 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv13-2A0A140T8N6 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv13-2A0A140T8N6 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Trbv13-2A0A140T8N6 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Trbv13-2A0A140T8N6 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv13-2A0A140T8N6 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv13-2A0A140T8N6 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv13-2A0A140T8N6 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv13-2A0A140T8N6 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv13-2A0A140T8N6 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv13-2A0A140T8N6 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Trbv13-2A0A140T8N6 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv13-2A0A140T8N6 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv13-2A0A140T8N6 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv13-2A0A140T8N6 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv13-2A0A140T8N6 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv13-2A0A140T8N6 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC13.63□□□□□ -0.23
Trbv13-2A0A140T8N6 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC13.63□□□□□ -0.23
Trbv13-2A0A140T8N6 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv13-2A0A140T8N6 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv13-2A0A140T8N6 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Trbv13-2A0A140T8N6 Cdkn3-203ENSMUST00000227149 1952 ntBASIC13.63□□□□□ -0.23
Trbv13-2A0A140T8N6 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC13.63□□□□□ -0.23
Trbv13-2A0A140T8N6 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv13-2A0A140T8N6 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC13.63□□□□□ -0.23
Trbv13-2A0A140T8N6 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trbv13-2A0A140T8N6 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trbv13-2A0A140T8N6 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC13.62□□□□□ -0.23
Trbv13-2A0A140T8N6 Gm6085-201ENSMUST00000182774 1470 ntBASIC13.62□□□□□ -0.23
Trbv13-2A0A140T8N6 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trbv13-2A0A140T8N6 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trbv13-2A0A140T8N6 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Trbv13-2A0A140T8N6 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Trbv13-2A0A140T8N6 Gm34220-201ENSMUST00000223001 2709 ntBASIC13.62□□□□□ -0.23
Trbv13-2A0A140T8N6 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trbv13-2A0A140T8N6 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trbv13-2A0A140T8N6 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trbv13-2A0A140T8N6 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trbv13-2A0A140T8N6 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trbv13-2A0A140T8N6 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv13-2A0A140T8N6 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Trbv13-2A0A140T8N6 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv13-2A0A140T8N6 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv13-2A0A140T8N6 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv13-2A0A140T8N6 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv13-2A0A140T8N6 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv13-2A0A140T8N6 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC13.61□□□□□ -0.23
Trbv13-2A0A140T8N6 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC13.61□□□□□ -0.23
Trbv13-2A0A140T8N6 Gm43137-201ENSMUST00000198052 594 ntBASIC13.61□□□□□ -0.23
Trbv13-2A0A140T8N6 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC13.61□□□□□ -0.23
Trbv13-2A0A140T8N6 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv13-2A0A140T8N6 Gm5576-201ENSMUST00000075809 1236 ntBASIC13.61□□□□□ -0.23
Trbv13-2A0A140T8N6 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv13-2A0A140T8N6 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv13-2A0A140T8N6 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv13-2A0A140T8N6 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Trbv13-2A0A140T8N6 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv13-2A0A140T8N6 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Trbv13-2A0A140T8N6 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trbv13-2A0A140T8N6 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trbv13-2A0A140T8N6 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC13.6□□□□□ -0.23
Trbv13-2A0A140T8N6 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Trbv13-2A0A140T8N6 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Trbv13-2A0A140T8N6 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC13.6□□□□□ -0.23
Trbv13-2A0A140T8N6 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trbv13-2A0A140T8N6 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Trbv13-2A0A140T8N6 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Trbv13-2A0A140T8N6 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trbv13-2A0A140T8N6 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trbv13-2A0A140T8N6 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
Trbv13-2A0A140T8N6 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trbv13-2A0A140T8N6 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Trbv13-2A0A140T8N6 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trbv13-2A0A140T8N6 Gm10209-201ENSMUST00000203397 1607 ntBASIC13.6□□□□□ -0.23
Trbv13-2A0A140T8N6 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trbv13-2A0A140T8N6 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Trbv13-2A0A140T8N6 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trbv13-2A0A140T8N6 Gm6802-201ENSMUST00000167843 1983 ntBASIC13.6□□□□□ -0.23
Trbv13-2A0A140T8N6 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trbv13-2A0A140T8N6 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trbv13-2A0A140T8N6 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Trbv13-2A0A140T8N6 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trbv13-2A0A140T8N6 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
Trbv13-2A0A140T8N6 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trbv13-2A0A140T8N6 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms