Protein–RNA interactions for Protein: A0A140T8N5

Igkv6-23, Immunoglobulin kappa variable 6-23 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv6-23A0A140T8N5 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Igkv6-23A0A140T8N5 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.42■□□□□ 0.38
Igkv6-23A0A140T8N5 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Igkv6-23A0A140T8N5 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Igkv6-23A0A140T8N5 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Igkv6-23A0A140T8N5 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
Igkv6-23A0A140T8N5 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Igkv6-23A0A140T8N5 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Igkv6-23A0A140T8N5 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Igkv6-23A0A140T8N5 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Igkv6-23A0A140T8N5 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Igkv6-23A0A140T8N5 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.41■□□□□ 0.38
Igkv6-23A0A140T8N5 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Igkv6-23A0A140T8N5 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.41■□□□□ 0.38
Igkv6-23A0A140T8N5 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Igkv6-23A0A140T8N5 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Igkv6-23A0A140T8N5 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Igkv6-23A0A140T8N5 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC17.4■□□□□ 0.38
Igkv6-23A0A140T8N5 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Igkv6-23A0A140T8N5 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Igkv6-23A0A140T8N5 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Igkv6-23A0A140T8N5 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC17.4■□□□□ 0.38
Igkv6-23A0A140T8N5 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Igkv6-23A0A140T8N5 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.4■□□□□ 0.38
Igkv6-23A0A140T8N5 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Igkv6-23A0A140T8N5 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Igkv6-23A0A140T8N5 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Igkv6-23A0A140T8N5 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC17.4■□□□□ 0.38
Igkv6-23A0A140T8N5 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Igkv6-23A0A140T8N5 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Igkv6-23A0A140T8N5 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Igkv6-23A0A140T8N5 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Igkv6-23A0A140T8N5 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Igkv6-23A0A140T8N5 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Igkv6-23A0A140T8N5 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC17.39■□□□□ 0.37
Igkv6-23A0A140T8N5 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Igkv6-23A0A140T8N5 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.39■□□□□ 0.37
Igkv6-23A0A140T8N5 Gm29257-201ENSMUST00000186115 639 ntBASIC17.39■□□□□ 0.37
Igkv6-23A0A140T8N5 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.39■□□□□ 0.37
Igkv6-23A0A140T8N5 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.39■□□□□ 0.37
Igkv6-23A0A140T8N5 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Igkv6-23A0A140T8N5 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Igkv6-23A0A140T8N5 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Igkv6-23A0A140T8N5 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Igkv6-23A0A140T8N5 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Igkv6-23A0A140T8N5 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.38■□□□□ 0.37
Igkv6-23A0A140T8N5 Gm5297-201ENSMUST00000198555 1171 ntBASIC17.38■□□□□ 0.37
Igkv6-23A0A140T8N5 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Igkv6-23A0A140T8N5 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Igkv6-23A0A140T8N5 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Igkv6-23A0A140T8N5 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Igkv6-23A0A140T8N5 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Igkv6-23A0A140T8N5 Gm43909-201ENSMUST00000203443 1876 ntBASIC17.37■□□□□ 0.37
Igkv6-23A0A140T8N5 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Igkv6-23A0A140T8N5 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17.37■□□□□ 0.37
Igkv6-23A0A140T8N5 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Igkv6-23A0A140T8N5 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.37■□□□□ 0.37
Igkv6-23A0A140T8N5 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Igkv6-23A0A140T8N5 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC17.36■□□□□ 0.37
Igkv6-23A0A140T8N5 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.36■□□□□ 0.37
Igkv6-23A0A140T8N5 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Igkv6-23A0A140T8N5 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Igkv6-23A0A140T8N5 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC17.36■□□□□ 0.37
Igkv6-23A0A140T8N5 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Igkv6-23A0A140T8N5 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Igkv6-23A0A140T8N5 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Igkv6-23A0A140T8N5 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Igkv6-23A0A140T8N5 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Igkv6-23A0A140T8N5 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Igkv6-23A0A140T8N5 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Igkv6-23A0A140T8N5 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Igkv6-23A0A140T8N5 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Igkv6-23A0A140T8N5 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Igkv6-23A0A140T8N5 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Igkv6-23A0A140T8N5 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Igkv6-23A0A140T8N5 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Igkv6-23A0A140T8N5 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Igkv6-23A0A140T8N5 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Igkv6-23A0A140T8N5 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.34■□□□□ 0.37
Igkv6-23A0A140T8N5 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Igkv6-23A0A140T8N5 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Igkv6-23A0A140T8N5 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Igkv6-23A0A140T8N5 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Igkv6-23A0A140T8N5 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Igkv6-23A0A140T8N5 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Igkv6-23A0A140T8N5 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Igkv6-23A0A140T8N5 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Igkv6-23A0A140T8N5 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Igkv6-23A0A140T8N5 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Igkv6-23A0A140T8N5 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Igkv6-23A0A140T8N5 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Igkv6-23A0A140T8N5 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Igkv6-23A0A140T8N5 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Igkv6-23A0A140T8N5 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Igkv6-23A0A140T8N5 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Igkv6-23A0A140T8N5 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Igkv6-23A0A140T8N5 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC17.33■□□□□ 0.36
Igkv6-23A0A140T8N5 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.33■□□□□ 0.36
Igkv6-23A0A140T8N5 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC17.33■□□□□ 0.36
Igkv6-23A0A140T8N5 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms