Protein–RNA interactions for Protein: A0A140LI48

Pcdhgb8, Protocadherin gamma subfamily B, 8, mousemouse

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb8A0A140LI48 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Pcdhgb8A0A140LI48 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC17.62■□□□□ 0.41
Pcdhgb8A0A140LI48 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC17.62■□□□□ 0.41
Pcdhgb8A0A140LI48 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC17.62■□□□□ 0.41
Pcdhgb8A0A140LI48 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhgb8A0A140LI48 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhgb8A0A140LI48 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhgb8A0A140LI48 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhgb8A0A140LI48 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhgb8A0A140LI48 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhgb8A0A140LI48 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhgb8A0A140LI48 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhgb8A0A140LI48 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhgb8A0A140LI48 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC17.61■□□□□ 0.41
Pcdhgb8A0A140LI48 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC17.61■□□□□ 0.41
Pcdhgb8A0A140LI48 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhgb8A0A140LI48 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhgb8A0A140LI48 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhgb8A0A140LI48 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhgb8A0A140LI48 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhgb8A0A140LI48 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.61■□□□□ 0.41
Pcdhgb8A0A140LI48 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhgb8A0A140LI48 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.6■□□□□ 0.41
Pcdhgb8A0A140LI48 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhgb8A0A140LI48 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Pcdhgb8A0A140LI48 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhgb8A0A140LI48 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhgb8A0A140LI48 Golgb1-201ENSMUST00000023534 498 ntBASIC17.6■□□□□ 0.41
Pcdhgb8A0A140LI48 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhgb8A0A140LI48 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhgb8A0A140LI48 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC17.6■□□□□ 0.41
Pcdhgb8A0A140LI48 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Pcdhgb8A0A140LI48 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhgb8A0A140LI48 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhgb8A0A140LI48 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhgb8A0A140LI48 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhgb8A0A140LI48 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhgb8A0A140LI48 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhgb8A0A140LI48 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhgb8A0A140LI48 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.6■□□□□ 0.41
Pcdhgb8A0A140LI48 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Pcdhgb8A0A140LI48 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhgb8A0A140LI48 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Pcdhgb8A0A140LI48 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhgb8A0A140LI48 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhgb8A0A140LI48 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhgb8A0A140LI48 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhgb8A0A140LI48 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhgb8A0A140LI48 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Pcdhgb8A0A140LI48 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
Pcdhgb8A0A140LI48 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhgb8A0A140LI48 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhgb8A0A140LI48 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhgb8A0A140LI48 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdhgb8A0A140LI48 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdhgb8A0A140LI48 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.41
Pcdhgb8A0A140LI48 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.58■□□□□ 0.41
Pcdhgb8A0A140LI48 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhgb8A0A140LI48 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC17.58■□□□□ 0.4
Pcdhgb8A0A140LI48 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhgb8A0A140LI48 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhgb8A0A140LI48 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Pcdhgb8A0A140LI48 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhgb8A0A140LI48 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhgb8A0A140LI48 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhgb8A0A140LI48 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Pcdhgb8A0A140LI48 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.57■□□□□ 0.4
Pcdhgb8A0A140LI48 Gm21956-201ENSMUST00000179946 522 ntBASIC17.57■□□□□ 0.4
Pcdhgb8A0A140LI48 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhgb8A0A140LI48 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhgb8A0A140LI48 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhgb8A0A140LI48 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhgb8A0A140LI48 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhgb8A0A140LI48 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhgb8A0A140LI48 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Pcdhgb8A0A140LI48 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhgb8A0A140LI48 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Pcdhgb8A0A140LI48 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC17.56■□□□□ 0.4
Pcdhgb8A0A140LI48 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Pcdhgb8A0A140LI48 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhgb8A0A140LI48 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.56■□□□□ 0.4
Pcdhgb8A0A140LI48 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Pcdhgb8A0A140LI48 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.56■□□□□ 0.4
Pcdhgb8A0A140LI48 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhgb8A0A140LI48 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhgb8A0A140LI48 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhgb8A0A140LI48 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Pcdhgb8A0A140LI48 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhgb8A0A140LI48 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhgb8A0A140LI48 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhgb8A0A140LI48 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Pcdhgb8A0A140LI48 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhgb8A0A140LI48 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhgb8A0A140LI48 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhgb8A0A140LI48 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC17.55■□□□□ 0.4
Pcdhgb8A0A140LI48 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhgb8A0A140LI48 Gm37035-201ENSMUST00000194809 2148 ntBASIC17.55■□□□□ 0.4
Pcdhgb8A0A140LI48 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhgb8A0A140LI48 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhgb8A0A140LI48 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms