Protein–RNA interactions for Protein: A0A0G2JF93

Trav13n-2, T cell receptor alpha variable 13D-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-2A0A0G2JF93 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC12.98□□□□□ -0.33
Trav13n-2A0A0G2JF93 AC116713.1-201ENSMUST00000215074 430 ntBASIC12.98□□□□□ -0.33
Trav13n-2A0A0G2JF93 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13n-2A0A0G2JF93 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC12.98□□□□□ -0.33
Trav13n-2A0A0G2JF93 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13n-2A0A0G2JF93 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13n-2A0A0G2JF93 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC12.98□□□□□ -0.33
Trav13n-2A0A0G2JF93 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13n-2A0A0G2JF93 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13n-2A0A0G2JF93 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13n-2A0A0G2JF93 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13n-2A0A0G2JF93 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13n-2A0A0G2JF93 Gm10461-201ENSMUST00000202073 4786 ntBASIC12.98□□□□□ -0.33
Trav13n-2A0A0G2JF93 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13n-2A0A0G2JF93 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13n-2A0A0G2JF93 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13n-2A0A0G2JF93 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13n-2A0A0G2JF93 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13n-2A0A0G2JF93 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC12.97□□□□□ -0.33
Trav13n-2A0A0G2JF93 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC12.97□□□□□ -0.33
Trav13n-2A0A0G2JF93 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
Trav13n-2A0A0G2JF93 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Trav13n-2A0A0G2JF93 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trav13n-2A0A0G2JF93 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13n-2A0A0G2JF93 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC12.97□□□□□ -0.33
Trav13n-2A0A0G2JF93 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13n-2A0A0G2JF93 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13n-2A0A0G2JF93 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trav13n-2A0A0G2JF93 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13n-2A0A0G2JF93 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13n-2A0A0G2JF93 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC12.97□□□□□ -0.33
Trav13n-2A0A0G2JF93 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13n-2A0A0G2JF93 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav13n-2A0A0G2JF93 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav13n-2A0A0G2JF93 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav13n-2A0A0G2JF93 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav13n-2A0A0G2JF93 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav13n-2A0A0G2JF93 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav13n-2A0A0G2JF93 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav13n-2A0A0G2JF93 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Trav13n-2A0A0G2JF93 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav13n-2A0A0G2JF93 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav13n-2A0A0G2JF93 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav13n-2A0A0G2JF93 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav13n-2A0A0G2JF93 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav13n-2A0A0G2JF93 Gm6311-201ENSMUST00000073790 878 ntBASIC12.96□□□□□ -0.33
Trav13n-2A0A0G2JF93 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav13n-2A0A0G2JF93 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav13n-2A0A0G2JF93 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav13n-2A0A0G2JF93 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav13n-2A0A0G2JF93 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Trav13n-2A0A0G2JF93 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav13n-2A0A0G2JF93 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav13n-2A0A0G2JF93 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
Trav13n-2A0A0G2JF93 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav13n-2A0A0G2JF93 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13n-2A0A0G2JF93 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13n-2A0A0G2JF93 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Trav13n-2A0A0G2JF93 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13n-2A0A0G2JF93 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13n-2A0A0G2JF93 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13n-2A0A0G2JF93 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13n-2A0A0G2JF93 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13n-2A0A0G2JF93 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC12.95□□□□□ -0.34
Trav13n-2A0A0G2JF93 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13n-2A0A0G2JF93 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13n-2A0A0G2JF93 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13n-2A0A0G2JF93 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13n-2A0A0G2JF93 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13n-2A0A0G2JF93 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC12.95□□□□□ -0.34
Trav13n-2A0A0G2JF93 Gm5784-201ENSMUST00000179344 2478 ntBASIC12.95□□□□□ -0.34
Trav13n-2A0A0G2JF93 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13n-2A0A0G2JF93 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13n-2A0A0G2JF93 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC12.94□□□□□ -0.34
Trav13n-2A0A0G2JF93 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC12.94□□□□□ -0.34
Trav13n-2A0A0G2JF93 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13n-2A0A0G2JF93 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC12.94□□□□□ -0.34
Trav13n-2A0A0G2JF93 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC12.94□□□□□ -0.34
Trav13n-2A0A0G2JF93 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13n-2A0A0G2JF93 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13n-2A0A0G2JF93 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13n-2A0A0G2JF93 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13n-2A0A0G2JF93 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13n-2A0A0G2JF93 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13n-2A0A0G2JF93 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13n-2A0A0G2JF93 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Trav13n-2A0A0G2JF93 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC12.93□□□□□ -0.34
Trav13n-2A0A0G2JF93 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13n-2A0A0G2JF93 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13n-2A0A0G2JF93 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13n-2A0A0G2JF93 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13n-2A0A0G2JF93 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13n-2A0A0G2JF93 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13n-2A0A0G2JF93 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13n-2A0A0G2JF93 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13n-2A0A0G2JF93 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13n-2A0A0G2JF93 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13n-2A0A0G2JF93 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13n-2A0A0G2JF93 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13n-2A0A0G2JF93 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms