Protein–RNA interactions for Protein: A0A0B4J1J9

Trav11, T cell receptor alpha variable 11 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav11A0A0B4J1J9 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav11A0A0B4J1J9 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav11A0A0B4J1J9 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.25
Trav11A0A0B4J1J9 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav11A0A0B4J1J9 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Trav11A0A0B4J1J9 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Trav11A0A0B4J1J9 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav11A0A0B4J1J9 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav11A0A0B4J1J9 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav11A0A0B4J1J9 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav11A0A0B4J1J9 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav11A0A0B4J1J9 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav11A0A0B4J1J9 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav11A0A0B4J1J9 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Trav11A0A0B4J1J9 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC13.46□□□□□ -0.26
Trav11A0A0B4J1J9 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Trav11A0A0B4J1J9 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav11A0A0B4J1J9 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Trav11A0A0B4J1J9 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC13.45□□□□□ -0.26
Trav11A0A0B4J1J9 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav11A0A0B4J1J9 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav11A0A0B4J1J9 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav11A0A0B4J1J9 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav11A0A0B4J1J9 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC13.45□□□□□ -0.26
Trav11A0A0B4J1J9 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav11A0A0B4J1J9 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav11A0A0B4J1J9 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav11A0A0B4J1J9 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav11A0A0B4J1J9 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav11A0A0B4J1J9 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav11A0A0B4J1J9 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav11A0A0B4J1J9 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav11A0A0B4J1J9 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav11A0A0B4J1J9 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Trav11A0A0B4J1J9 AC166356.1-201ENSMUST00000228236 1426 ntBASIC13.44□□□□□ -0.26
Trav11A0A0B4J1J9 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav11A0A0B4J1J9 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC13.44□□□□□ -0.26
Trav11A0A0B4J1J9 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav11A0A0B4J1J9 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav11A0A0B4J1J9 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav11A0A0B4J1J9 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav11A0A0B4J1J9 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Trav11A0A0B4J1J9 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav11A0A0B4J1J9 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav11A0A0B4J1J9 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav11A0A0B4J1J9 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC13.43□□□□□ -0.26
Trav11A0A0B4J1J9 Nsd1-203ENSMUST00000224156 1149 ntBASIC13.43□□□□□ -0.26
Trav11A0A0B4J1J9 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav11A0A0B4J1J9 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav11A0A0B4J1J9 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav11A0A0B4J1J9 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav11A0A0B4J1J9 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav11A0A0B4J1J9 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav11A0A0B4J1J9 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav11A0A0B4J1J9 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav11A0A0B4J1J9 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav11A0A0B4J1J9 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav11A0A0B4J1J9 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Trav11A0A0B4J1J9 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav11A0A0B4J1J9 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav11A0A0B4J1J9 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav11A0A0B4J1J9 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav11A0A0B4J1J9 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav11A0A0B4J1J9 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav11A0A0B4J1J9 Gm16464-201ENSMUST00000117815 1095 ntBASIC13.42□□□□□ -0.26
Trav11A0A0B4J1J9 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav11A0A0B4J1J9 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav11A0A0B4J1J9 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav11A0A0B4J1J9 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav11A0A0B4J1J9 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav11A0A0B4J1J9 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav11A0A0B4J1J9 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav11A0A0B4J1J9 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Trav11A0A0B4J1J9 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav11A0A0B4J1J9 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC13.42□□□□□ -0.26
Trav11A0A0B4J1J9 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
Trav11A0A0B4J1J9 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav11A0A0B4J1J9 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav11A0A0B4J1J9 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav11A0A0B4J1J9 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav11A0A0B4J1J9 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Trav11A0A0B4J1J9 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav11A0A0B4J1J9 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav11A0A0B4J1J9 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC13.41□□□□□ -0.26
Trav11A0A0B4J1J9 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav11A0A0B4J1J9 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav11A0A0B4J1J9 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav11A0A0B4J1J9 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC13.41□□□□□ -0.26
Trav11A0A0B4J1J9 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC13.41□□□□□ -0.26
Trav11A0A0B4J1J9 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav11A0A0B4J1J9 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Trav11A0A0B4J1J9 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav11A0A0B4J1J9 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav11A0A0B4J1J9 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Trav11A0A0B4J1J9 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav11A0A0B4J1J9 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav11A0A0B4J1J9 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav11A0A0B4J1J9 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav11A0A0B4J1J9 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav11A0A0B4J1J9 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms