Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6-4A0A075B6B4 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Trav6-4A0A075B6B4 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6-4A0A075B6B4 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6-4A0A075B6B4 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6-4A0A075B6B4 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6-4A0A075B6B4 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC15.11■□□□□ 0.01
Trav6-4A0A075B6B4 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6-4A0A075B6B4 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6-4A0A075B6B4 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6-4A0A075B6B4 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6-4A0A075B6B4 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC15.1■□□□□ 0.01
Trav6-4A0A075B6B4 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6-4A0A075B6B4 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC15.1■□□□□ 0.01
Trav6-4A0A075B6B4 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6-4A0A075B6B4 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6-4A0A075B6B4 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6-4A0A075B6B4 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6-4A0A075B6B4 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6-4A0A075B6B4 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6-4A0A075B6B4 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6-4A0A075B6B4 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6-4A0A075B6B4 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6-4A0A075B6B4 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6-4A0A075B6B4 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6-4A0A075B6B4 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6-4A0A075B6B4 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6-4A0A075B6B4 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6-4A0A075B6B4 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6-4A0A075B6B4 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6-4A0A075B6B4 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Trav6-4A0A075B6B4 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6-4A0A075B6B4 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Trav6-4A0A075B6B4 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Trav6-4A0A075B6B4 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6-4A0A075B6B4 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6-4A0A075B6B4 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6-4A0A075B6B4 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6-4A0A075B6B4 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6-4A0A075B6B4 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6-4A0A075B6B4 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav6-4A0A075B6B4 Gm43909-201ENSMUST00000203443 1876 ntBASIC15.08■□□□□ 0.01
Trav6-4A0A075B6B4 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC15.08■□□□□ 0
Trav6-4A0A075B6B4 Cdkn3-203ENSMUST00000227149 1952 ntBASIC15.08■□□□□ 0
Trav6-4A0A075B6B4 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC15.08■□□□□ 0
Trav6-4A0A075B6B4 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Trav6-4A0A075B6B4 Mir7075-201ENSMUST00000184187 82 ntBASIC15.08■□□□□ 0
Trav6-4A0A075B6B4 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Trav6-4A0A075B6B4 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC15.08■□□□□ 0
Trav6-4A0A075B6B4 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC15.08■□□□□ 0
Trav6-4A0A075B6B4 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav6-4A0A075B6B4 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav6-4A0A075B6B4 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Trav6-4A0A075B6B4 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trav6-4A0A075B6B4 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav6-4A0A075B6B4 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Trav6-4A0A075B6B4 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav6-4A0A075B6B4 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav6-4A0A075B6B4 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav6-4A0A075B6B4 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav6-4A0A075B6B4 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav6-4A0A075B6B4 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC15.07■□□□□ 0
Trav6-4A0A075B6B4 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC15.07■□□□□ 0
Trav6-4A0A075B6B4 Spcs1-204ENSMUST00000226782 949 ntBASIC15.07■□□□□ 0
Trav6-4A0A075B6B4 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Trav6-4A0A075B6B4 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Trav6-4A0A075B6B4 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav6-4A0A075B6B4 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav6-4A0A075B6B4 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav6-4A0A075B6B4 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Trav6-4A0A075B6B4 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav6-4A0A075B6B4 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC15.06■□□□□ 0
Trav6-4A0A075B6B4 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav6-4A0A075B6B4 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Trav6-4A0A075B6B4 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
Trav6-4A0A075B6B4 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav6-4A0A075B6B4 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav6-4A0A075B6B4 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC15.06■□□□□ 0
Trav6-4A0A075B6B4 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Trav6-4A0A075B6B4 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav6-4A0A075B6B4 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
Trav6-4A0A075B6B4 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav6-4A0A075B6B4 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC15.06■□□□□ 0
Trav6-4A0A075B6B4 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav6-4A0A075B6B4 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Trav6-4A0A075B6B4 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav6-4A0A075B6B4 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC15.06■□□□□ 0
Trav6-4A0A075B6B4 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav6-4A0A075B6B4 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav6-4A0A075B6B4 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav6-4A0A075B6B4 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trav6-4A0A075B6B4 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Trav6-4A0A075B6B4 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC15.05■□□□□ -0
Trav6-4A0A075B6B4 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC15.05■□□□□ -0
Trav6-4A0A075B6B4 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav6-4A0A075B6B4 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC15.05■□□□□ -0
Trav6-4A0A075B6B4 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC15.05■□□□□ -0
Trav6-4A0A075B6B4 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Trav6-4A0A075B6B4 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Trav6-4A0A075B6B4 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms