Protein–RNA interactions for Protein: A0A075B6B1

Trav14d-1, T cell receptor alpha variable 14D-1 (Fragment), mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav14d-1A0A075B6B1 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav14d-1A0A075B6B1 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Trav14d-1A0A075B6B1 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC14.6□□□□□ -0.07
Trav14d-1A0A075B6B1 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC14.6□□□□□ -0.07
Trav14d-1A0A075B6B1 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav14d-1A0A075B6B1 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC14.6□□□□□ -0.07
Trav14d-1A0A075B6B1 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav14d-1A0A075B6B1 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav14d-1A0A075B6B1 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav14d-1A0A075B6B1 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav14d-1A0A075B6B1 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav14d-1A0A075B6B1 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav14d-1A0A075B6B1 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav14d-1A0A075B6B1 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav14d-1A0A075B6B1 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav14d-1A0A075B6B1 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
Trav14d-1A0A075B6B1 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav14d-1A0A075B6B1 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav14d-1A0A075B6B1 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav14d-1A0A075B6B1 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav14d-1A0A075B6B1 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav14d-1A0A075B6B1 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav14d-1A0A075B6B1 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav14d-1A0A075B6B1 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.07
Trav14d-1A0A075B6B1 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav14d-1A0A075B6B1 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav14d-1A0A075B6B1 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav14d-1A0A075B6B1 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav14d-1A0A075B6B1 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav14d-1A0A075B6B1 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav14d-1A0A075B6B1 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Trav14d-1A0A075B6B1 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav14d-1A0A075B6B1 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav14d-1A0A075B6B1 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Trav14d-1A0A075B6B1 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav14d-1A0A075B6B1 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav14d-1A0A075B6B1 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav14d-1A0A075B6B1 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav14d-1A0A075B6B1 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC14.57□□□□□ -0.08
Trav14d-1A0A075B6B1 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav14d-1A0A075B6B1 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav14d-1A0A075B6B1 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav14d-1A0A075B6B1 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC14.57□□□□□ -0.08
Trav14d-1A0A075B6B1 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav14d-1A0A075B6B1 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav14d-1A0A075B6B1 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav14d-1A0A075B6B1 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav14d-1A0A075B6B1 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav14d-1A0A075B6B1 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav14d-1A0A075B6B1 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav14d-1A0A075B6B1 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav14d-1A0A075B6B1 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav14d-1A0A075B6B1 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav14d-1A0A075B6B1 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav14d-1A0A075B6B1 Cdkn3-203ENSMUST00000227149 1952 ntBASIC14.56□□□□□ -0.08
Trav14d-1A0A075B6B1 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav14d-1A0A075B6B1 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav14d-1A0A075B6B1 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Trav14d-1A0A075B6B1 Gm14523-201ENSMUST00000117260 558 ntBASIC14.56□□□□□ -0.08
Trav14d-1A0A075B6B1 Gm27502-201ENSMUST00000183495 199 ntBASIC14.56□□□□□ -0.08
Trav14d-1A0A075B6B1 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav14d-1A0A075B6B1 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav14d-1A0A075B6B1 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav14d-1A0A075B6B1 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav14d-1A0A075B6B1 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav14d-1A0A075B6B1 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav14d-1A0A075B6B1 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav14d-1A0A075B6B1 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav14d-1A0A075B6B1 Fam105a-203ENSMUST00000226170 3043 ntBASIC14.55□□□□□ -0.08
Trav14d-1A0A075B6B1 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav14d-1A0A075B6B1 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav14d-1A0A075B6B1 Dapk1-207ENSMUST00000226059 5009 ntBASIC14.55□□□□□ -0.08
Trav14d-1A0A075B6B1 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav14d-1A0A075B6B1 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav14d-1A0A075B6B1 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Trav14d-1A0A075B6B1 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav14d-1A0A075B6B1 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav14d-1A0A075B6B1 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
Trav14d-1A0A075B6B1 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav14d-1A0A075B6B1 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav14d-1A0A075B6B1 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav14d-1A0A075B6B1 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Trav14d-1A0A075B6B1 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav14d-1A0A075B6B1 Gm6627-201ENSMUST00000218299 2386 ntBASIC14.54□□□□□ -0.08
Trav14d-1A0A075B6B1 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Trav14d-1A0A075B6B1 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav14d-1A0A075B6B1 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav14d-1A0A075B6B1 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav14d-1A0A075B6B1 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
Trav14d-1A0A075B6B1 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav14d-1A0A075B6B1 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav14d-1A0A075B6B1 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav14d-1A0A075B6B1 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Trav14d-1A0A075B6B1 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC14.53□□□□□ -0.08
Trav14d-1A0A075B6B1 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav14d-1A0A075B6B1 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav14d-1A0A075B6B1 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav14d-1A0A075B6B1 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Trav14d-1A0A075B6B1 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC14.53□□□□□ -0.08
Trav14d-1A0A075B6B1 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms