Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav3-4A0A075B654 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav3-4A0A075B654 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Trav3-4A0A075B654 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav3-4A0A075B654 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav3-4A0A075B654 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav3-4A0A075B654 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav3-4A0A075B654 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC13.22□□□□□ -0.29
Trav3-4A0A075B654 AC131739.1-201ENSMUST00000221692 1245 ntBASIC13.22□□□□□ -0.29
Trav3-4A0A075B654 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav3-4A0A075B654 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav3-4A0A075B654 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav3-4A0A075B654 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav3-4A0A075B654 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav3-4A0A075B654 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav3-4A0A075B654 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav3-4A0A075B654 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav3-4A0A075B654 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav3-4A0A075B654 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav3-4A0A075B654 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav3-4A0A075B654 Gm10461-201ENSMUST00000202073 4786 ntBASIC13.21□□□□□ -0.29
Trav3-4A0A075B654 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav3-4A0A075B654 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav3-4A0A075B654 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav3-4A0A075B654 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav3-4A0A075B654 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Trav3-4A0A075B654 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav3-4A0A075B654 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav3-4A0A075B654 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav3-4A0A075B654 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Trav3-4A0A075B654 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav3-4A0A075B654 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav3-4A0A075B654 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC13.21□□□□□ -0.3
Trav3-4A0A075B654 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Trav3-4A0A075B654 Gm43548-201ENSMUST00000197139 2353 ntBASIC13.21□□□□□ -0.3
Trav3-4A0A075B654 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav3-4A0A075B654 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.3
Trav3-4A0A075B654 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav3-4A0A075B654 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav3-4A0A075B654 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav3-4A0A075B654 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav3-4A0A075B654 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav3-4A0A075B654 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav3-4A0A075B654 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav3-4A0A075B654 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav3-4A0A075B654 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav3-4A0A075B654 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC13.2□□□□□ -0.3
Trav3-4A0A075B654 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav3-4A0A075B654 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
Trav3-4A0A075B654 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC13.2□□□□□ -0.3
Trav3-4A0A075B654 Gm42809-201ENSMUST00000198429 1138 ntBASIC13.2□□□□□ -0.3
Trav3-4A0A075B654 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav3-4A0A075B654 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav3-4A0A075B654 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav3-4A0A075B654 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav3-4A0A075B654 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav3-4A0A075B654 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav3-4A0A075B654 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC13.2□□□□□ -0.3
Trav3-4A0A075B654 Gm6598-201ENSMUST00000202719 2615 ntBASIC13.2□□□□□ -0.3
Trav3-4A0A075B654 Fam105a-203ENSMUST00000226170 3043 ntBASIC13.2□□□□□ -0.3
Trav3-4A0A075B654 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav3-4A0A075B654 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav3-4A0A075B654 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC13.2□□□□□ -0.3
Trav3-4A0A075B654 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav3-4A0A075B654 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav3-4A0A075B654 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav3-4A0A075B654 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav3-4A0A075B654 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav3-4A0A075B654 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav3-4A0A075B654 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC13.19□□□□□ -0.3
Trav3-4A0A075B654 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav3-4A0A075B654 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav3-4A0A075B654 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Trav3-4A0A075B654 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav3-4A0A075B654 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav3-4A0A075B654 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav3-4A0A075B654 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav3-4A0A075B654 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Trav3-4A0A075B654 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav3-4A0A075B654 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav3-4A0A075B654 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav3-4A0A075B654 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav3-4A0A075B654 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav3-4A0A075B654 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav3-4A0A075B654 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav3-4A0A075B654 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC13.18□□□□□ -0.3
Trav3-4A0A075B654 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav3-4A0A075B654 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav3-4A0A075B654 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav3-4A0A075B654 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav3-4A0A075B654 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Trav3-4A0A075B654 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Trav3-4A0A075B654 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav3-4A0A075B654 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Trav3-4A0A075B654 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav3-4A0A075B654 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav3-4A0A075B654 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav3-4A0A075B654 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav3-4A0A075B654 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav3-4A0A075B654 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms