Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav16A0A075B653 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav16A0A075B653 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav16A0A075B653 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav16A0A075B653 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav16A0A075B653 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav16A0A075B653 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav16A0A075B653 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Trav16A0A075B653 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav16A0A075B653 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Trav16A0A075B653 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav16A0A075B653 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Trav16A0A075B653 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav16A0A075B653 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav16A0A075B653 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC15.11■□□□□ 0.01
Trav16A0A075B653 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav16A0A075B653 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC15.11■□□□□ 0.01
Trav16A0A075B653 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav16A0A075B653 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC15.1■□□□□ 0.01
Trav16A0A075B653 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav16A0A075B653 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav16A0A075B653 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav16A0A075B653 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav16A0A075B653 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav16A0A075B653 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Trav16A0A075B653 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav16A0A075B653 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC15.1■□□□□ 0.01
Trav16A0A075B653 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav16A0A075B653 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Trav16A0A075B653 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav16A0A075B653 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav16A0A075B653 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC15.1■□□□□ 0.01
Trav16A0A075B653 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav16A0A075B653 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav16A0A075B653 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav16A0A075B653 AC166356.1-201ENSMUST00000228236 1426 ntBASIC15.09■□□□□ 0.01
Trav16A0A075B653 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav16A0A075B653 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Trav16A0A075B653 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav16A0A075B653 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav16A0A075B653 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav16A0A075B653 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav16A0A075B653 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav16A0A075B653 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Trav16A0A075B653 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav16A0A075B653 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav16A0A075B653 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Trav16A0A075B653 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Trav16A0A075B653 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Trav16A0A075B653 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav16A0A075B653 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav16A0A075B653 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav16A0A075B653 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav16A0A075B653 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Trav16A0A075B653 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Trav16A0A075B653 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav16A0A075B653 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC15.08■□□□□ 0
Trav16A0A075B653 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav16A0A075B653 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav16A0A075B653 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav16A0A075B653 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav16A0A075B653 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Trav16A0A075B653 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Trav16A0A075B653 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav16A0A075B653 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Trav16A0A075B653 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Trav16A0A075B653 Rarb-207ENSMUST00000225921 2756 ntBASIC15.07■□□□□ 0
Trav16A0A075B653 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC15.07■□□□□ 0
Trav16A0A075B653 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav16A0A075B653 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav16A0A075B653 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC15.07■□□□□ 0
Trav16A0A075B653 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Trav16A0A075B653 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav16A0A075B653 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav16A0A075B653 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
Trav16A0A075B653 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav16A0A075B653 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav16A0A075B653 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav16A0A075B653 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav16A0A075B653 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav16A0A075B653 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav16A0A075B653 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Trav16A0A075B653 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC15.06■□□□□ 0
Trav16A0A075B653 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav16A0A075B653 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav16A0A075B653 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav16A0A075B653 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC15.06■□□□□ 0
Trav16A0A075B653 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Trav16A0A075B653 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Trav16A0A075B653 Gm10620-201ENSMUST00000098379 1332 ntBASIC15.06■□□□□ 0
Trav16A0A075B653 Gm5784-201ENSMUST00000179344 2478 ntBASIC15.06■□□□□ 0
Trav16A0A075B653 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav16A0A075B653 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Trav16A0A075B653 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav16A0A075B653 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Trav16A0A075B653 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC15.05■□□□□ 0
Trav16A0A075B653 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav16A0A075B653 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav16A0A075B653 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Trav16A0A075B653 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms