Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav5-4A0A075B652 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trav5-4A0A075B652 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
Trav5-4A0A075B652 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav5-4A0A075B652 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trav5-4A0A075B652 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Trav5-4A0A075B652 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav5-4A0A075B652 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trav5-4A0A075B652 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav5-4A0A075B652 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trav5-4A0A075B652 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trav5-4A0A075B652 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav5-4A0A075B652 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Trav5-4A0A075B652 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav5-4A0A075B652 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav5-4A0A075B652 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav5-4A0A075B652 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trav5-4A0A075B652 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav5-4A0A075B652 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trav5-4A0A075B652 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav5-4A0A075B652 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC16.32■□□□□ 0.2
Trav5-4A0A075B652 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Trav5-4A0A075B652 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav5-4A0A075B652 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav5-4A0A075B652 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav5-4A0A075B652 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav5-4A0A075B652 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav5-4A0A075B652 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav5-4A0A075B652 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav5-4A0A075B652 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC16.31■□□□□ 0.2
Trav5-4A0A075B652 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav5-4A0A075B652 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav5-4A0A075B652 Gm14117-201ENSMUST00000122417 843 ntBASIC16.31■□□□□ 0.2
Trav5-4A0A075B652 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
Trav5-4A0A075B652 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC16.31■□□□□ 0.2
Trav5-4A0A075B652 Rps24-207ENSMUST00000224568 714 ntBASIC16.31■□□□□ 0.2
Trav5-4A0A075B652 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav5-4A0A075B652 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav5-4A0A075B652 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav5-4A0A075B652 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav5-4A0A075B652 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav5-4A0A075B652 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav5-4A0A075B652 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav5-4A0A075B652 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav5-4A0A075B652 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC16.3■□□□□ 0.2
Trav5-4A0A075B652 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Trav5-4A0A075B652 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav5-4A0A075B652 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav5-4A0A075B652 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav5-4A0A075B652 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav5-4A0A075B652 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav5-4A0A075B652 Gm45102-201ENSMUST00000207427 857 ntBASIC16.3■□□□□ 0.2
Trav5-4A0A075B652 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav5-4A0A075B652 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trav5-4A0A075B652 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Trav5-4A0A075B652 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trav5-4A0A075B652 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC16.3■□□□□ 0.2
Trav5-4A0A075B652 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trav5-4A0A075B652 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
Trav5-4A0A075B652 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav5-4A0A075B652 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav5-4A0A075B652 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav5-4A0A075B652 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Trav5-4A0A075B652 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC16.29■□□□□ 0.2
Trav5-4A0A075B652 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav5-4A0A075B652 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Trav5-4A0A075B652 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Trav5-4A0A075B652 Golph3-202ENSMUST00000226517 2359 ntBASIC16.29■□□□□ 0.2
Trav5-4A0A075B652 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC16.29■□□□□ 0.2
Trav5-4A0A075B652 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC16.28■□□□□ 0.2
Trav5-4A0A075B652 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC16.28■□□□□ 0.2
Trav5-4A0A075B652 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav5-4A0A075B652 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
Trav5-4A0A075B652 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.28■□□□□ 0.2
Trav5-4A0A075B652 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Trav5-4A0A075B652 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav5-4A0A075B652 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav5-4A0A075B652 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Trav5-4A0A075B652 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav5-4A0A075B652 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav5-4A0A075B652 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav5-4A0A075B652 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav5-4A0A075B652 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav5-4A0A075B652 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav5-4A0A075B652 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC16.27■□□□□ 0.2
Trav5-4A0A075B652 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC16.27■□□□□ 0.2
Trav5-4A0A075B652 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC16.27■□□□□ 0.2
Trav5-4A0A075B652 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC16.27■□□□□ 0.2
Trav5-4A0A075B652 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav5-4A0A075B652 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trav5-4A0A075B652 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Trav5-4A0A075B652 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trav5-4A0A075B652 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trav5-4A0A075B652 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC16.26■□□□□ 0.19
Trav5-4A0A075B652 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav5-4A0A075B652 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav5-4A0A075B652 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav5-4A0A075B652 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trav5-4A0A075B652 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC16.26■□□□□ 0.19
Trav5-4A0A075B652 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms