Protein–RNA interactions for Protein: A0A075B651

Trav4-4-dv10, T cell receptor alpha variable 4-4-DV10 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-4-dv10A0A075B651 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav4-4-dv10A0A075B651 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC15.3■□□□□ 0.04
Trav4-4-dv10A0A075B651 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Trav4-4-dv10A0A075B651 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav4-4-dv10A0A075B651 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC15.3■□□□□ 0.04
Trav4-4-dv10A0A075B651 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC15.3■□□□□ 0.04
Trav4-4-dv10A0A075B651 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav4-4-dv10A0A075B651 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
Trav4-4-dv10A0A075B651 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav4-4-dv10A0A075B651 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav4-4-dv10A0A075B651 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Trav4-4-dv10A0A075B651 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Trav4-4-dv10A0A075B651 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav4-4-dv10A0A075B651 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav4-4-dv10A0A075B651 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Trav4-4-dv10A0A075B651 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav4-4-dv10A0A075B651 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Trav4-4-dv10A0A075B651 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav4-4-dv10A0A075B651 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Trav4-4-dv10A0A075B651 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav4-4-dv10A0A075B651 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Trav4-4-dv10A0A075B651 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav4-4-dv10A0A075B651 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav4-4-dv10A0A075B651 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Trav4-4-dv10A0A075B651 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC15.28■□□□□ 0.04
Trav4-4-dv10A0A075B651 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav4-4-dv10A0A075B651 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav4-4-dv10A0A075B651 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav4-4-dv10A0A075B651 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav4-4-dv10A0A075B651 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav4-4-dv10A0A075B651 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Trav4-4-dv10A0A075B651 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC15.27■□□□□ 0.04
Trav4-4-dv10A0A075B651 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Trav4-4-dv10A0A075B651 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav4-4-dv10A0A075B651 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC15.27■□□□□ 0.04
Trav4-4-dv10A0A075B651 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC15.27■□□□□ 0.04
Trav4-4-dv10A0A075B651 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav4-4-dv10A0A075B651 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav4-4-dv10A0A075B651 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Trav4-4-dv10A0A075B651 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Trav4-4-dv10A0A075B651 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC15.26■□□□□ 0.03
Trav4-4-dv10A0A075B651 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC15.26■□□□□ 0.03
Trav4-4-dv10A0A075B651 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav4-4-dv10A0A075B651 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav4-4-dv10A0A075B651 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav4-4-dv10A0A075B651 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav4-4-dv10A0A075B651 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav4-4-dv10A0A075B651 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav4-4-dv10A0A075B651 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav4-4-dv10A0A075B651 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC15.25■□□□□ 0.03
Trav4-4-dv10A0A075B651 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav4-4-dv10A0A075B651 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav4-4-dv10A0A075B651 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav4-4-dv10A0A075B651 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav4-4-dv10A0A075B651 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav4-4-dv10A0A075B651 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Trav4-4-dv10A0A075B651 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC15.25■□□□□ 0.03
Trav4-4-dv10A0A075B651 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav4-4-dv10A0A075B651 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav4-4-dv10A0A075B651 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC15.25■□□□□ 0.03
Trav4-4-dv10A0A075B651 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav4-4-dv10A0A075B651 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav4-4-dv10A0A075B651 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC15.25■□□□□ 0.03
Trav4-4-dv10A0A075B651 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav4-4-dv10A0A075B651 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav4-4-dv10A0A075B651 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav4-4-dv10A0A075B651 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Trav4-4-dv10A0A075B651 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Trav4-4-dv10A0A075B651 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav4-4-dv10A0A075B651 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav4-4-dv10A0A075B651 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav4-4-dv10A0A075B651 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav4-4-dv10A0A075B651 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav4-4-dv10A0A075B651 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav4-4-dv10A0A075B651 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav4-4-dv10A0A075B651 AC126028.2-201ENSMUST00000228100 1833 ntBASIC15.24■□□□□ 0.03
Trav4-4-dv10A0A075B651 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav4-4-dv10A0A075B651 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav4-4-dv10A0A075B651 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav4-4-dv10A0A075B651 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Trav4-4-dv10A0A075B651 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav4-4-dv10A0A075B651 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav4-4-dv10A0A075B651 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav4-4-dv10A0A075B651 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav4-4-dv10A0A075B651 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav4-4-dv10A0A075B651 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav4-4-dv10A0A075B651 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav4-4-dv10A0A075B651 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav4-4-dv10A0A075B651 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Trav4-4-dv10A0A075B651 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav4-4-dv10A0A075B651 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav4-4-dv10A0A075B651 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav4-4-dv10A0A075B651 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav4-4-dv10A0A075B651 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav4-4-dv10A0A075B651 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC15.23■□□□□ 0.03
Trav4-4-dv10A0A075B651 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav4-4-dv10A0A075B651 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav4-4-dv10A0A075B651 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC15.23■□□□□ 0.03
Trav4-4-dv10A0A075B651 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav4-4-dv10A0A075B651 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 215.6 ms