Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC15.3■□□□□ 0.04
Trav9-1A0A075B601 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Trav9-1A0A075B601 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav9-1A0A075B601 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Trav9-1A0A075B601 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Trav9-1A0A075B601 Gm10616-201ENSMUST00000205285 2127 ntBASIC15.3■□□□□ 0.04
Trav9-1A0A075B601 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC15.3■□□□□ 0.04
Trav9-1A0A075B601 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav9-1A0A075B601 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav9-1A0A075B601 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Trav9-1A0A075B601 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav9-1A0A075B601 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav9-1A0A075B601 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Trav9-1A0A075B601 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav9-1A0A075B601 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav9-1A0A075B601 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav9-1A0A075B601 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav9-1A0A075B601 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav9-1A0A075B601 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav9-1A0A075B601 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav9-1A0A075B601 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav9-1A0A075B601 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav9-1A0A075B601 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC15.29■□□□□ 0.04
Trav9-1A0A075B601 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav9-1A0A075B601 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC15.29■□□□□ 0.04
Trav9-1A0A075B601 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav9-1A0A075B601 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav9-1A0A075B601 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav9-1A0A075B601 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav9-1A0A075B601 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav9-1A0A075B601 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav9-1A0A075B601 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav9-1A0A075B601 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav9-1A0A075B601 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav9-1A0A075B601 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC15.28■□□□□ 0.04
Trav9-1A0A075B601 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav9-1A0A075B601 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Trav9-1A0A075B601 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav9-1A0A075B601 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Trav9-1A0A075B601 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav9-1A0A075B601 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav9-1A0A075B601 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Trav9-1A0A075B601 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav9-1A0A075B601 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav9-1A0A075B601 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav9-1A0A075B601 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav9-1A0A075B601 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav9-1A0A075B601 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trav9-1A0A075B601 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC15.27■□□□□ 0.04
Trav9-1A0A075B601 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC15.27■□□□□ 0.04
Trav9-1A0A075B601 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC15.27■□□□□ 0.04
Trav9-1A0A075B601 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav9-1A0A075B601 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav9-1A0A075B601 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav9-1A0A075B601 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav9-1A0A075B601 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav9-1A0A075B601 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav9-1A0A075B601 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
Trav9-1A0A075B601 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trav9-1A0A075B601 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav9-1A0A075B601 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav9-1A0A075B601 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav9-1A0A075B601 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav9-1A0A075B601 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav9-1A0A075B601 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Trav9-1A0A075B601 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav9-1A0A075B601 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav9-1A0A075B601 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Trav9-1A0A075B601 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav9-1A0A075B601 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC15.26■□□□□ 0.03
Trav9-1A0A075B601 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav9-1A0A075B601 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav9-1A0A075B601 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC15.26■□□□□ 0.03
Trav9-1A0A075B601 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav9-1A0A075B601 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav9-1A0A075B601 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav9-1A0A075B601 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Trav9-1A0A075B601 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav9-1A0A075B601 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav9-1A0A075B601 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav9-1A0A075B601 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav9-1A0A075B601 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
Trav9-1A0A075B601 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC15.25■□□□□ 0.03
Trav9-1A0A075B601 Gm22238-201ENSMUST00000175222 88 ntBASIC15.25■□□□□ 0.03
Trav9-1A0A075B601 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC15.25■□□□□ 0.03
Trav9-1A0A075B601 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav9-1A0A075B601 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC15.25■□□□□ 0.03
Trav9-1A0A075B601 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav9-1A0A075B601 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav9-1A0A075B601 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Trav9-1A0A075B601 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav9-1A0A075B601 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav9-1A0A075B601 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Trav9-1A0A075B601 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav9-1A0A075B601 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav9-1A0A075B601 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav9-1A0A075B601 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav9-1A0A075B601 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC15.24■□□□□ 0.03
Trav9-1A0A075B601 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav9-1A0A075B601 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms