Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 AC126028.2-201ENSMUST00000228100 1833 ntBASIC15.78■□□□□ 0.12
Trav6-1A0A075B5Z8 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav6-1A0A075B5Z8 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav6-1A0A075B5Z8 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav6-1A0A075B5Z8 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav6-1A0A075B5Z8 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav6-1A0A075B5Z8 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trav6-1A0A075B5Z8 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav6-1A0A075B5Z8 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Trav6-1A0A075B5Z8 Gm40881-201ENSMUST00000223397 166 ntBASIC15.77■□□□□ 0.12
Trav6-1A0A075B5Z8 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Trav6-1A0A075B5Z8 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav6-1A0A075B5Z8 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav6-1A0A075B5Z8 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Trav6-1A0A075B5Z8 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav6-1A0A075B5Z8 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav6-1A0A075B5Z8 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC15.76■□□□□ 0.11
Trav6-1A0A075B5Z8 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav6-1A0A075B5Z8 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav6-1A0A075B5Z8 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav6-1A0A075B5Z8 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Trav6-1A0A075B5Z8 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC15.76■□□□□ 0.11
Trav6-1A0A075B5Z8 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
Trav6-1A0A075B5Z8 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav6-1A0A075B5Z8 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav6-1A0A075B5Z8 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Trav6-1A0A075B5Z8 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Trav6-1A0A075B5Z8 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav6-1A0A075B5Z8 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Trav6-1A0A075B5Z8 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
Trav6-1A0A075B5Z8 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav6-1A0A075B5Z8 Golph3-205ENSMUST00000228671 2842 ntBASIC15.75■□□□□ 0.11
Trav6-1A0A075B5Z8 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav6-1A0A075B5Z8 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trav6-1A0A075B5Z8 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav6-1A0A075B5Z8 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav6-1A0A075B5Z8 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trav6-1A0A075B5Z8 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC15.75■□□□□ 0.11
Trav6-1A0A075B5Z8 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC15.75■□□□□ 0.11
Trav6-1A0A075B5Z8 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav6-1A0A075B5Z8 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav6-1A0A075B5Z8 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Trav6-1A0A075B5Z8 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav6-1A0A075B5Z8 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav6-1A0A075B5Z8 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav6-1A0A075B5Z8 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav6-1A0A075B5Z8 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC15.74■□□□□ 0.11
Trav6-1A0A075B5Z8 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav6-1A0A075B5Z8 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Trav6-1A0A075B5Z8 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav6-1A0A075B5Z8 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC15.74■□□□□ 0.11
Trav6-1A0A075B5Z8 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Trav6-1A0A075B5Z8 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav6-1A0A075B5Z8 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav6-1A0A075B5Z8 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC15.73■□□□□ 0.11
Trav6-1A0A075B5Z8 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav6-1A0A075B5Z8 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav6-1A0A075B5Z8 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav6-1A0A075B5Z8 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav6-1A0A075B5Z8 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC15.73■□□□□ 0.11
Trav6-1A0A075B5Z8 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav6-1A0A075B5Z8 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav6-1A0A075B5Z8 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav6-1A0A075B5Z8 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Trav6-1A0A075B5Z8 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav6-1A0A075B5Z8 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav6-1A0A075B5Z8 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav6-1A0A075B5Z8 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav6-1A0A075B5Z8 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Trav6-1A0A075B5Z8 Gm43231-201ENSMUST00000202960 2258 ntBASIC15.72■□□□□ 0.11
Trav6-1A0A075B5Z8 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav6-1A0A075B5Z8 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC15.72■□□□□ 0.11
Trav6-1A0A075B5Z8 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC15.72■□□□□ 0.11
Trav6-1A0A075B5Z8 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Trav6-1A0A075B5Z8 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
Trav6-1A0A075B5Z8 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC15.72■□□□□ 0.11
Trav6-1A0A075B5Z8 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Trav6-1A0A075B5Z8 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Trav6-1A0A075B5Z8 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Trav6-1A0A075B5Z8 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav6-1A0A075B5Z8 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC15.71■□□□□ 0.11
Trav6-1A0A075B5Z8 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC15.71■□□□□ 0.11
Trav6-1A0A075B5Z8 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav6-1A0A075B5Z8 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav6-1A0A075B5Z8 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav6-1A0A075B5Z8 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav6-1A0A075B5Z8 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav6-1A0A075B5Z8 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav6-1A0A075B5Z8 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav6-1A0A075B5Z8 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav6-1A0A075B5Z8 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trav6-1A0A075B5Z8 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav6-1A0A075B5Z8 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav6-1A0A075B5Z8 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Trav6-1A0A075B5Z8 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav6-1A0A075B5Z8 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav6-1A0A075B5Z8 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC15.7■□□□□ 0.1
Trav6-1A0A075B5Z8 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav6-1A0A075B5Z8 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav6-1A0A075B5Z8 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms