Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 2610016A17Rik-201ENSMUST00000185211 474 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trub1Q8C0D0 Gm29617-201ENSMUST00000185730 610 ntBASIC10.38□□□□□ -0.75
Trub1Q8C0D0 Gm37688-201ENSMUST00000195195 465 ntBASIC10.38□□□□□ -0.75
Trub1Q8C0D0 Gm18862-201ENSMUST00000204643 933 ntBASIC10.38□□□□□ -0.75
Trub1Q8C0D0 Smim23-201ENSMUST00000020508 620 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trub1Q8C0D0 Gm45542-201ENSMUST00000210456 438 ntTSL 2 BASIC10.38□□□□□ -0.75
Trub1Q8C0D0 Gm45500-201ENSMUST00000211676 803 ntBASIC10.38□□□□□ -0.75
Trub1Q8C0D0 Gm31786-201ENSMUST00000212305 564 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trub1Q8C0D0 AC068459.1-201ENSMUST00000222492 905 ntTSL 3 BASIC10.38□□□□□ -0.75
Trub1Q8C0D0 AC165092.1-201ENSMUST00000224018 486 ntBASIC10.38□□□□□ -0.75
Trub1Q8C0D0 AC142266.1-201ENSMUST00000228107 415 ntBASIC10.38□□□□□ -0.75
Trub1Q8C0D0 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trub1Q8C0D0 Nat8f5-201ENSMUST00000032074 986 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trub1Q8C0D0 Rps9-201ENSMUST00000006496 751 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trub1Q8C0D0 Rpl3-201ENSMUST00000081650 1293 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trub1Q8C0D0 Fam122b-201ENSMUST00000071023 4334 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trub1Q8C0D0 Ccdc33-201ENSMUST00000042205 2632 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trub1Q8C0D0 CT572998.1-201ENSMUST00000219636 1557 ntTSL 3 BASIC10.38□□□□□ -0.75
Trub1Q8C0D0 Dhrs7b-201ENSMUST00000042281 1553 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trub1Q8C0D0 Nbr1-201ENSMUST00000071537 3239 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Trub1Q8C0D0 Kcnh6-201ENSMUST00000001965 3368 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trub1Q8C0D0 5730422E09Rik-201ENSMUST00000180733 1740 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trub1Q8C0D0 AC164161.2-201ENSMUST00000217446 1730 ntTSL 5 BASIC10.38□□□□□ -0.75
Trub1Q8C0D0 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trub1Q8C0D0 Cdc25b-202ENSMUST00000079857 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trub1Q8C0D0 Lhfpl2-201ENSMUST00000054274 4348 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trub1Q8C0D0 Mfap3l-201ENSMUST00000034066 1896 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trub1Q8C0D0 Rassf2-201ENSMUST00000028814 8233 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trub1Q8C0D0 Cped1-201ENSMUST00000115382 2002 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Trub1Q8C0D0 Ablim1-206ENSMUST00000111528 2481 ntTSL 5 BASIC10.38□□□□□ -0.75
Trub1Q8C0D0 Gm11427-201ENSMUST00000117952 1696 ntBASIC10.38□□□□□ -0.75
Trub1Q8C0D0 Shroom2-202ENSMUST00000101141 7494 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trub1Q8C0D0 Rnft1-201ENSMUST00000020827 4452 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trub1Q8C0D0 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trub1Q8C0D0 Pkp1-203ENSMUST00000163260 3023 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trub1Q8C0D0 Ptpn20-201ENSMUST00000022508 3153 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trub1Q8C0D0 Gm33940-201ENSMUST00000209205 1601 ntTSL 5 BASIC10.37□□□□□ -0.75
Trub1Q8C0D0 Med19-201ENSMUST00000102645 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trub1Q8C0D0 Cspp1-201ENSMUST00000071087 4355 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trub1Q8C0D0 Duoxa1-203ENSMUST00000110538 2467 ntTSL 5 BASIC10.37□□□□□ -0.75
Trub1Q8C0D0 Tank-203ENSMUST00000112495 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trub1Q8C0D0 Gm12461-201ENSMUST00000120231 1239 ntBASIC10.37□□□□□ -0.75
Trub1Q8C0D0 Gm7799-201ENSMUST00000133080 476 ntBASIC10.37□□□□□ -0.75
Trub1Q8C0D0 Gm8203-201ENSMUST00000173192 387 ntBASIC10.37□□□□□ -0.75
Trub1Q8C0D0 Gm42433-201ENSMUST00000196806 940 ntBASIC10.37□□□□□ -0.75
Trub1Q8C0D0 Gm43547-201ENSMUST00000197729 328 ntBASIC10.37□□□□□ -0.75
Trub1Q8C0D0 Ckb-ps2-201ENSMUST00000198886 1001 ntBASIC10.37□□□□□ -0.75
Trub1Q8C0D0 Gm35611-201ENSMUST00000205323 799 ntTSL 3 BASIC10.37□□□□□ -0.75
Trub1Q8C0D0 Pde2a-204ENSMUST00000209537 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trub1Q8C0D0 4930448C13Rik-205ENSMUST00000221781 806 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trub1Q8C0D0 CT009757.1-201ENSMUST00000222801 738 ntTSL 5 BASIC10.37□□□□□ -0.75
Trub1Q8C0D0 AC116797.2-202ENSMUST00000223587 1017 ntBASIC10.37□□□□□ -0.75
Trub1Q8C0D0 AC156790.2-201ENSMUST00000227115 568 ntBASIC10.37□□□□□ -0.75
Trub1Q8C0D0 3110009E18Rik-201ENSMUST00000027637 1007 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trub1Q8C0D0 Ssna1-201ENSMUST00000028342 862 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trub1Q8C0D0 Uqcrc2-201ENSMUST00000033176 1896 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trub1Q8C0D0 Sfxn5-201ENSMUST00000045846 3656 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trub1Q8C0D0 Defb29-201ENSMUST00000060598 462 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trub1Q8C0D0 Atxn1-201ENSMUST00000091628 10569 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trub1Q8C0D0 Slco5a1-204ENSMUST00000136197 5123 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trub1Q8C0D0 Fndc7-202ENSMUST00000102620 3477 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trub1Q8C0D0 D2hgdh-202ENSMUST00000112881 3459 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trub1Q8C0D0 Prmt7-201ENSMUST00000071592 3472 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trub1Q8C0D0 Jarid2-208ENSMUST00000173246 5997 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trub1Q8C0D0 Mon2-201ENSMUST00000037557 5511 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trub1Q8C0D0 Gm4454-201ENSMUST00000190585 2578 ntBASIC10.37□□□□□ -0.75
Trub1Q8C0D0 Gm26797-202ENSMUST00000213132 2562 ntTSL 5 BASIC10.37□□□□□ -0.75
Trub1Q8C0D0 Hdac7-207ENSMUST00000120683 3701 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trub1Q8C0D0 Itga10-201ENSMUST00000029744 5044 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Trub1Q8C0D0 Gm21874-202ENSMUST00000190315 1538 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Trub1Q8C0D0 Fcrla-203ENSMUST00000159171 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trub1Q8C0D0 Nod2-203ENSMUST00000118370 4653 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trub1Q8C0D0 Cntln-203ENSMUST00000107190 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trub1Q8C0D0 Epb41-204ENSMUST00000105970 5059 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Trub1Q8C0D0 Fermt1-201ENSMUST00000038280 4915 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Trub1Q8C0D0 Nav2-204ENSMUST00000183659 7765 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Trub1Q8C0D0 Eif2d-203ENSMUST00000112446 2153 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trub1Q8C0D0 Cpt1b-201ENSMUST00000109313 2895 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trub1Q8C0D0 R3hcc1l-201ENSMUST00000026188 4112 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trub1Q8C0D0 Gm40557-201ENSMUST00000220782 2736 ntTSL 5 BASIC10.36□□□□□ -0.75
Trub1Q8C0D0 Dram2-202ENSMUST00000067630 3271 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trub1Q8C0D0 Ptprm-201ENSMUST00000037974 5186 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trub1Q8C0D0 Gm12333-201ENSMUST00000155508 2669 ntTSL 3 BASIC10.36□□□□□ -0.75
Trub1Q8C0D0 Bgn-207ENSMUST00000169489 1574 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
Trub1Q8C0D0 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trub1Q8C0D0 H2-M10.4-201ENSMUST00000057502 1410 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trub1Q8C0D0 Mcm3ap-201ENSMUST00000170795 6427 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trub1Q8C0D0 Gm8152-201ENSMUST00000120842 637 ntBASIC10.36□□□□□ -0.75
Trub1Q8C0D0 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trub1Q8C0D0 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC10.36□□□□□ -0.75
Trub1Q8C0D0 Rps9-205ENSMUST00000126562 896 ntTSL 2 BASIC10.36□□□□□ -0.75
Trub1Q8C0D0 Gm12977-201ENSMUST00000133742 942 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trub1Q8C0D0 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trub1Q8C0D0 Gm22609-201ENSMUST00000158286 121 ntBASIC10.36□□□□□ -0.75
Trub1Q8C0D0 Gm24368-201ENSMUST00000175388 106 ntBASIC10.36□□□□□ -0.75
Trub1Q8C0D0 Gm21958-201ENSMUST00000178832 648 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
Trub1Q8C0D0 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC10.36□□□□□ -0.75
Trub1Q8C0D0 CT030035.1-201ENSMUST00000223964 935 ntBASIC10.36□□□□□ -0.75
Trub1Q8C0D0 Lsm3-201ENSMUST00000040607 743 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trub1Q8C0D0 Gm6960-201ENSMUST00000051629 639 ntBASIC10.36□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 98.8 ms