Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Gm13713-202ENSMUST00000155472 285 ntTSL 5 BASIC12.1□□□□□ -0.47
Vps54Q5SPW0 Gm22609-201ENSMUST00000158286 121 ntBASIC12.1□□□□□ -0.47
Vps54Q5SPW0 Gm26810-201ENSMUST00000181153 1106 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Vps54Q5SPW0 Pou1f1-205ENSMUST00000184525 1020 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Vps54Q5SPW0 Gm44917-201ENSMUST00000208798 520 ntBASIC12.1□□□□□ -0.47
Vps54Q5SPW0 AC156274.1-201ENSMUST00000219193 634 ntBASIC12.1□□□□□ -0.47
Vps54Q5SPW0 Gm5951-201ENSMUST00000220283 504 ntBASIC12.1□□□□□ -0.47
Vps54Q5SPW0 4930448C13Rik-205ENSMUST00000221781 806 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Vps54Q5SPW0 Rpl21-ps2-201ENSMUST00000222933 481 ntBASIC12.1□□□□□ -0.47
Vps54Q5SPW0 CT025547.1-201ENSMUST00000225127 578 ntBASIC12.1□□□□□ -0.47
Vps54Q5SPW0 3830406C13Rik-213ENSMUST00000225294 1191 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Vps54Q5SPW0 Tmem208-202ENSMUST00000098453 950 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Vps54Q5SPW0 Imp4-201ENSMUST00000027303 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps54Q5SPW0 Tyw3-204ENSMUST00000170461 4270 ntTSL 5 BASIC12.1□□□□□ -0.47
Vps54Q5SPW0 Tcaf1-202ENSMUST00000045140 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps54Q5SPW0 Oas1h-201ENSMUST00000072476 1703 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps54Q5SPW0 Gm4780-202ENSMUST00000215200 2644 ntBASIC12.1□□□□□ -0.47
Vps54Q5SPW0 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps54Q5SPW0 Gpatch4-201ENSMUST00000029707 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps54Q5SPW0 Gm43321-201ENSMUST00000198897 2409 ntBASIC12.1□□□□□ -0.47
Vps54Q5SPW0 Tnfrsf9-204ENSMUST00000105672 1999 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps54Q5SPW0 St3gal6-207ENSMUST00000137035 4123 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps54Q5SPW0 Lox-202ENSMUST00000171470 4468 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps54Q5SPW0 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps54Q5SPW0 Ptk2b-202ENSMUST00000089250 3903 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Vps54Q5SPW0 Pcdhga7-201ENSMUST00000192511 4730 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps54Q5SPW0 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps54Q5SPW0 Pcdhgc5-201ENSMUST00000055935 4741 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps54Q5SPW0 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC12.1□□□□□ -0.47
Vps54Q5SPW0 Timm9-208ENSMUST00000221797 2564 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Vps54Q5SPW0 Gm36426-201ENSMUST00000222903 1795 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Vps54Q5SPW0 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Vps54Q5SPW0 Xrcc6-201ENSMUST00000069530 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps54Q5SPW0 Prrg3-201ENSMUST00000048790 5931 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps54Q5SPW0 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC12.1□□□□□ -0.47
Vps54Q5SPW0 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Vps54Q5SPW0 Slc7a3-202ENSMUST00000101362 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Vps54Q5SPW0 Rpgr-202ENSMUST00000072393 2380 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
Vps54Q5SPW0 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
Vps54Q5SPW0 Gm8050-201ENSMUST00000171987 1595 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Vps54Q5SPW0 Gm43597-202ENSMUST00000201992 4620 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Vps54Q5SPW0 Gmip-201ENSMUST00000036074 3933 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vps54Q5SPW0 Slc19a1-208ENSMUST00000136925 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vps54Q5SPW0 Cish-201ENSMUST00000085102 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vps54Q5SPW0 Abhd4-201ENSMUST00000041197 2401 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vps54Q5SPW0 Ubap2l-203ENSMUST00000090908 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vps54Q5SPW0 Mfsd11-201ENSMUST00000021173 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vps54Q5SPW0 Gm3532-201ENSMUST00000181880 1396 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Vps54Q5SPW0 Tcl1-201ENSMUST00000041316 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vps54Q5SPW0 4930470P17Rik-201ENSMUST00000062355 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vps54Q5SPW0 Lnpk-201ENSMUST00000064503 3195 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vps54Q5SPW0 Igll1-201ENSMUST00000100136 870 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Vps54Q5SPW0 Trav10d-201ENSMUST00000103646 406 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Vps54Q5SPW0 Junos-202ENSMUST00000125438 559 ntTSL 2 BASIC12.09□□□□□ -0.47
Vps54Q5SPW0 Spata3-205ENSMUST00000130504 1100 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vps54Q5SPW0 6030460B20Rik-201ENSMUST00000191764 1058 ntBASIC12.09□□□□□ -0.47
Vps54Q5SPW0 Zfp655-204ENSMUST00000199003 601 ntTSL 2 BASIC12.09□□□□□ -0.47
Vps54Q5SPW0 Gm34248-201ENSMUST00000200027 474 ntBASIC12.09□□□□□ -0.47
Vps54Q5SPW0 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Vps54Q5SPW0 1700029N11Rik-203ENSMUST00000220639 1092 ntTSL 5 BASIC12.09□□□□□ -0.47
Vps54Q5SPW0 Cks2-201ENSMUST00000075853 692 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vps54Q5SPW0 D2hgdh-202ENSMUST00000112881 3459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vps54Q5SPW0 Tph1-202ENSMUST00000107669 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vps54Q5SPW0 E130308A19Rik-202ENSMUST00000070150 10856 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vps54Q5SPW0 Mettl18-202ENSMUST00000111490 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vps54Q5SPW0 Gm43585-201ENSMUST00000199375 1403 ntBASIC12.09□□□□□ -0.47
Vps54Q5SPW0 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vps54Q5SPW0 Gpm6b-204ENSMUST00000112226 3174 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vps54Q5SPW0 CK137956-201ENSMUST00000030614 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Vps54Q5SPW0 Slc5a4a-201ENSMUST00000020450 2055 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Vps54Q5SPW0 Gdi2-201ENSMUST00000059515 2077 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Vps54Q5SPW0 Tulp2-203ENSMUST00000107758 1597 ntTSL 5 BASIC12.09□□□□□ -0.47
Vps54Q5SPW0 5730596B20Rik-201ENSMUST00000070587 3354 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Vps54Q5SPW0 Zdhhc3-208ENSMUST00000147563 6987 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Vps54Q5SPW0 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.47
Vps54Q5SPW0 Pif1-201ENSMUST00000047099 3685 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vps54Q5SPW0 Anapc15-213ENSMUST00000178851 2797 ntTSL 2 BASIC12.08□□□□□ -0.48
Vps54Q5SPW0 Pds5a-201ENSMUST00000031104 4146 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Vps54Q5SPW0 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Vps54Q5SPW0 Prdm1-202ENSMUST00000105490 4025 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vps54Q5SPW0 Gm44913-201ENSMUST00000208060 2990 ntBASIC12.08□□□□□ -0.48
Vps54Q5SPW0 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vps54Q5SPW0 Atg4b-201ENSMUST00000027502 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vps54Q5SPW0 Cd1d1-201ENSMUST00000029717 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vps54Q5SPW0 Ces1f-201ENSMUST00000034178 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vps54Q5SPW0 Pex5l-204ENSMUST00000108224 2721 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Vps54Q5SPW0 Nrap-202ENSMUST00000073536 5501 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vps54Q5SPW0 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Vps54Q5SPW0 Atp6v0a4-201ENSMUST00000040259 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vps54Q5SPW0 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Vps54Q5SPW0 Tnnt3-213ENSMUST00000105952 1040 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vps54Q5SPW0 Tnnt3-214ENSMUST00000105953 1049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vps54Q5SPW0 Tnnt3-215ENSMUST00000105954 1052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vps54Q5SPW0 Tnnt3-216ENSMUST00000105955 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vps54Q5SPW0 Tnnt3-218ENSMUST00000105958 1050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vps54Q5SPW0 Gm13777-201ENSMUST00000118208 345 ntBASIC12.08□□□□□ -0.48
Vps54Q5SPW0 Rps9-205ENSMUST00000126562 896 ntTSL 2 BASIC12.08□□□□□ -0.48
Vps54Q5SPW0 Aknaos-201ENSMUST00000144095 1104 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Vps54Q5SPW0 Gm7805-201ENSMUST00000154348 448 ntBASIC12.08□□□□□ -0.48
Vps54Q5SPW0 Tnnt3-225ENSMUST00000179658 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms