Protein–RNA interactions for Protein: Q04886

Sox8, Transcription factor SOX-8, mousemouse

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox8Q04886 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC10.69□□□□□ -0.7
Sox8Q04886 Gm15506-201ENSMUST00000148776 1133 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Sox8Q04886 Gm14174-201ENSMUST00000153158 161 ntTSL 5 BASIC10.69□□□□□ -0.7
Sox8Q04886 Gm15587-202ENSMUST00000156403 709 ntTSL 5 BASIC10.69□□□□□ -0.7
Sox8Q04886 Gm3752-202ENSMUST00000167833 450 ntTSL 5 BASIC10.69□□□□□ -0.7
Sox8Q04886 Gm10128-201ENSMUST00000171360 615 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Sox8Q04886 Ube2i-214ENSMUST00000174216 1144 ntTSL 2 BASIC10.69□□□□□ -0.7
Sox8Q04886 Gm27826-201ENSMUST00000175282 255 ntBASIC10.69□□□□□ -0.7
Sox8Q04886 Gm2956-202ENSMUST00000178722 450 ntTSL 5 BASIC10.69□□□□□ -0.7
Sox8Q04886 Gm9146-201ENSMUST00000182254 1006 ntBASIC10.69□□□□□ -0.7
Sox8Q04886 Mir6396-201ENSMUST00000183603 111 ntBASIC10.69□□□□□ -0.7
Sox8Q04886 Gm10340-202ENSMUST00000188235 615 ntTSL 5 BASIC10.69□□□□□ -0.7
Sox8Q04886 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC10.69□□□□□ -0.7
Sox8Q04886 Marc1-203ENSMUST00000189492 1239 ntTSL 5 BASIC10.69□□□□□ -0.7
Sox8Q04886 Lysmd4-203ENSMUST00000207757 631 ntAPPRIS ALT2 TSL 3 BASIC10.69□□□□□ -0.7
Sox8Q04886 Gm45783-201ENSMUST00000210877 656 ntAPPRIS P1 TSL 3 BASIC10.69□□□□□ -0.7
Sox8Q04886 AC161763.1-201ENSMUST00000227063 168 ntBASIC10.69□□□□□ -0.7
Sox8Q04886 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sox8Q04886 Apol7a-204ENSMUST00000176074 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sox8Q04886 Pcdhga7-201ENSMUST00000192511 4730 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sox8Q04886 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sox8Q04886 Pcdhgc5-201ENSMUST00000055935 4741 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sox8Q04886 Kirrel3-205ENSMUST00000187182 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sox8Q04886 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Sox8Q04886 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sox8Q04886 Zfp352-202ENSMUST00000107129 2276 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sox8Q04886 Htr1a-201ENSMUST00000022235 4484 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Sox8Q04886 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sox8Q04886 Gm38199-201ENSMUST00000192013 3277 ntBASIC10.69□□□□□ -0.7
Sox8Q04886 Tro-201ENSMUST00000087253 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sox8Q04886 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Sox8Q04886 Zfp131-203ENSMUST00000223722 3109 ntAPPRIS ALT2 BASIC10.69□□□□□ -0.7
Sox8Q04886 Gm15894-201ENSMUST00000162828 2067 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Sox8Q04886 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sox8Q04886 Zfp111-202ENSMUST00000073833 3079 ntAPPRIS P3 TSL 5 BASIC10.69□□□□□ -0.7
Sox8Q04886 Sp100-201ENSMUST00000054279 1978 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Sox8Q04886 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Sox8Q04886 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC10.68□□□□□ -0.7
Sox8Q04886 Cyp4a12b-201ENSMUST00000094887 2395 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sox8Q04886 5330439K02Rik-201ENSMUST00000180953 2312 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Sox8Q04886 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sox8Q04886 Pik3r3-202ENSMUST00000106490 1830 ntTSL 5 BASIC10.68□□□□□ -0.7
Sox8Q04886 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sox8Q04886 Gcg-201ENSMUST00000102733 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sox8Q04886 Ighv6-3-201ENSMUST00000103486 356 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Sox8Q04886 Ighv6-6-201ENSMUST00000103489 357 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Sox8Q04886 2310026L22Rik-201ENSMUST00000146658 400 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Sox8Q04886 Siglech-208ENSMUST00000173835 833 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Sox8Q04886 Gm29617-201ENSMUST00000185730 610 ntBASIC10.68□□□□□ -0.7
Sox8Q04886 6030460B20Rik-201ENSMUST00000191764 1058 ntBASIC10.68□□□□□ -0.7
Sox8Q04886 Gm19058-201ENSMUST00000192135 598 ntBASIC10.68□□□□□ -0.7
Sox8Q04886 Gm37851-201ENSMUST00000193871 889 ntBASIC10.68□□□□□ -0.7
Sox8Q04886 BB187690-201ENSMUST00000198619 1176 ntBASIC10.68□□□□□ -0.7
Sox8Q04886 Tas2r141-ps4-201ENSMUST00000205072 946 ntBASIC10.68□□□□□ -0.7
Sox8Q04886 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Sox8Q04886 Gm34667-201ENSMUST00000222974 1258 ntTSL 5 BASIC10.68□□□□□ -0.7
Sox8Q04886 Opn1mw-201ENSMUST00000033771 1227 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sox8Q04886 Gm9790-201ENSMUST00000054148 288 ntBASIC10.68□□□□□ -0.7
Sox8Q04886 Cks2-201ENSMUST00000075853 692 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sox8Q04886 Gm13271-201ENSMUST00000094992 549 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Sox8Q04886 Tex9-214ENSMUST00000184831 1652 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Sox8Q04886 Ube2q1-202ENSMUST00000196726 1650 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Sox8Q04886 Gm44510-201ENSMUST00000206288 4532 ntBASIC10.68□□□□□ -0.7
Sox8Q04886 Hnrnpc-201ENSMUST00000111610 2847 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Sox8Q04886 Hnrnpc-202ENSMUST00000164655 2843 ntTSL 5 BASIC10.68□□□□□ -0.7
Sox8Q04886 Rabgef1-201ENSMUST00000026390 2828 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sox8Q04886 Dcun1d4-203ENSMUST00000113558 4023 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Sox8Q04886 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sox8Q04886 Rnf111-202ENSMUST00000113595 4735 ntAPPRIS P2 TSL 5 BASIC10.68□□□□□ -0.7
Sox8Q04886 Rnf111-207ENSMUST00000215848 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sox8Q04886 Abl2-202ENSMUST00000166172 10151 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sox8Q04886 4930570G19Rik-201ENSMUST00000139363 3112 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Sox8Q04886 Ppp1r3c-201ENSMUST00000087321 2719 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sox8Q04886 Gm498-202ENSMUST00000152910 1507 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Sox8Q04886 Gm38116-201ENSMUST00000193873 1533 ntBASIC10.68□□□□□ -0.7
Sox8Q04886 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sox8Q04886 Adcy7-202ENSMUST00000168545 5937 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sox8Q04886 Zfp398-202ENSMUST00000114598 8328 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sox8Q04886 Grpr-201ENSMUST00000033730 2523 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sox8Q04886 Fam53c-202ENSMUST00000097622 4256 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sox8Q04886 Pdgfd-202ENSMUST00000168039 1795 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sox8Q04886 Gm44664-201ENSMUST00000206841 1786 ntBASIC10.67□□□□□ -0.7
Sox8Q04886 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sox8Q04886 Myh9-201ENSMUST00000016771 7433 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sox8Q04886 Zfp264-202ENSMUST00000208781 2801 ntTSL 5 BASIC10.67□□□□□ -0.7
Sox8Q04886 Ispd-206ENSMUST00000223068 2808 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sox8Q04886 Mgme1-201ENSMUST00000028910 2840 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sox8Q04886 Cnr2-202ENSMUST00000097843 3867 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sox8Q04886 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Sox8Q04886 Sh2d3c-202ENSMUST00000113242 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sox8Q04886 Gm6225-201ENSMUST00000181558 1700 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sox8Q04886 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sox8Q04886 Syna-201ENSMUST00000149604 2026 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Sox8Q04886 Ptpn7-201ENSMUST00000049449 3261 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sox8Q04886 Plscr2-205ENSMUST00000180154 1900 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sox8Q04886 Gm45153-201ENSMUST00000205957 1901 ntBASIC10.67□□□□□ -0.7
Sox8Q04886 Ppp6r2-201ENSMUST00000088788 2887 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Sox8Q04886 Mir181d-201ENSMUST00000102383 72 ntBASIC10.67□□□□□ -0.7
Sox8Q04886 Gm14326-203ENSMUST00000108932 888 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sox8Q04886 Cst10-202ENSMUST00000109938 729 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms