Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Gm28042-202ENSMUST00000129685 4472 ntAPPRIS P5 TSL 5 BASIC11.36□□□□□ -0.59
Chd1lQ9CXF7 Dsg1a-201ENSMUST00000077146 5686 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chd1lQ9CXF7 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chd1lQ9CXF7 Epb41-205ENSMUST00000105972 2577 ntAPPRIS P3 TSL 5 BASIC11.36□□□□□ -0.59
Chd1lQ9CXF7 Gm17644-201ENSMUST00000181272 3200 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Chd1lQ9CXF7 Ctsl-205ENSMUST00000222517 6168 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Chd1lQ9CXF7 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chd1lQ9CXF7 Tomm40l-202ENSMUST00000111326 2753 ntTSL 5 BASIC11.36□□□□□ -0.59
Chd1lQ9CXF7 Gm12758-201ENSMUST00000127010 4175 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Chd1lQ9CXF7 Rad52-212ENSMUST00000162461 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chd1lQ9CXF7 Smad2-201ENSMUST00000025453 2410 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chd1lQ9CXF7 Gm40655-201ENSMUST00000220802 1880 ntTSL 5 BASIC11.36□□□□□ -0.59
Chd1lQ9CXF7 Carhsp1-201ENSMUST00000008537 2849 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chd1lQ9CXF7 Gm19656-201ENSMUST00000208543 4610 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Chd1lQ9CXF7 Adgrl2-203ENSMUST00000168352 2151 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Chd1lQ9CXF7 Gm15204-201ENSMUST00000119454 2281 ntBASIC11.35□□□□□ -0.59
Chd1lQ9CXF7 Lin7a-202ENSMUST00000105280 1634 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Chd1lQ9CXF7 Suv39h1-202ENSMUST00000115637 2778 ntTSL 2 BASIC11.35□□□□□ -0.59
Chd1lQ9CXF7 Rab5b-201ENSMUST00000000727 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd1lQ9CXF7 Erich3-202ENSMUST00000098496 8280 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Chd1lQ9CXF7 Pa2g4-201ENSMUST00000026425 2432 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd1lQ9CXF7 Gm29151-201ENSMUST00000196669 2513 ntTSL 5 BASIC11.35□□□□□ -0.59
Chd1lQ9CXF7 Sema6a-203ENSMUST00000115449 6815 ntTSL 5 BASIC11.35□□□□□ -0.59
Chd1lQ9CXF7 Ube3a-203ENSMUST00000200758 9856 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd1lQ9CXF7 Aar2-201ENSMUST00000029158 3427 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd1lQ9CXF7 Spaca3-201ENSMUST00000103222 831 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd1lQ9CXF7 Zbp1-202ENSMUST00000109116 770 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Chd1lQ9CXF7 Gm4909-201ENSMUST00000118749 794 ntBASIC11.35□□□□□ -0.59
Chd1lQ9CXF7 Gm12791-201ENSMUST00000120788 655 ntBASIC11.35□□□□□ -0.59
Chd1lQ9CXF7 Aif1l-207ENSMUST00000148056 670 ntTSL 5 BASIC11.35□□□□□ -0.59
Chd1lQ9CXF7 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Chd1lQ9CXF7 Olfr1432-201ENSMUST00000180978 930 ntAPPRIS ALT2 BASIC11.35□□□□□ -0.59
Chd1lQ9CXF7 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC11.35□□□□□ -0.59
Chd1lQ9CXF7 Gm42617-201ENSMUST00000197640 1229 ntBASIC11.35□□□□□ -0.59
Chd1lQ9CXF7 Gm45670-201ENSMUST00000211382 711 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Chd1lQ9CXF7 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC11.35□□□□□ -0.59
Chd1lQ9CXF7 AC156016.4-201ENSMUST00000227470 647 ntBASIC11.35□□□□□ -0.59
Chd1lQ9CXF7 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd1lQ9CXF7 Vmn1r192-201ENSMUST00000072632 1067 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Chd1lQ9CXF7 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Chd1lQ9CXF7 Gm9946-201ENSMUST00000008011 1025 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Chd1lQ9CXF7 Gm42714-201ENSMUST00000202063 1364 ntBASIC11.35□□□□□ -0.59
Chd1lQ9CXF7 Enpp7-201ENSMUST00000092373 1370 ntAPPRIS P2 TSL 2 BASIC11.35□□□□□ -0.59
Chd1lQ9CXF7 Aqp8-202ENSMUST00000098056 1451 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd1lQ9CXF7 Aldh8a1-201ENSMUST00000042699 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd1lQ9CXF7 Cpsf3-201ENSMUST00000067284 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd1lQ9CXF7 Mpo-201ENSMUST00000020779 2750 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd1lQ9CXF7 Atxn7l1-212ENSMUST00000146040 2973 ntAPPRIS P5 TSL 5 BASIC11.35□□□□□ -0.59
Chd1lQ9CXF7 Mpp2-202ENSMUST00000100398 3577 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Chd1lQ9CXF7 Sbf2-205ENSMUST00000164759 7090 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Chd1lQ9CXF7 Tnr-201ENSMUST00000111669 4424 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Chd1lQ9CXF7 Sfi1-210ENSMUST00000140846 3604 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Chd1lQ9CXF7 Hivep2-204ENSMUST00000187083 9268 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd1lQ9CXF7 Gm37731-201ENSMUST00000194545 2237 ntBASIC11.35□□□□□ -0.59
Chd1lQ9CXF7 Nasp-202ENSMUST00000030457 2118 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd1lQ9CXF7 Vmn1r-ps128-201ENSMUST00000121211 1739 ntBASIC11.35□□□□□ -0.59
Chd1lQ9CXF7 Hsd17b13-201ENSMUST00000048118 1708 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd1lQ9CXF7 Poteg-201ENSMUST00000081321 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd1lQ9CXF7 Cmya5-201ENSMUST00000062122 11850 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd1lQ9CXF7 Cul4b-201ENSMUST00000016681 3354 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Chd1lQ9CXF7 Gm28775-201ENSMUST00000186918 2167 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Chd1lQ9CXF7 Ilf3-203ENSMUST00000213518 3513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd1lQ9CXF7 Ovch2-201ENSMUST00000106755 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd1lQ9CXF7 Ces1b-201ENSMUST00000109582 1964 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Chd1lQ9CXF7 Nobox-201ENSMUST00000031749 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd1lQ9CXF7 2310057M21Rik-201ENSMUST00000059438 6773 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd1lQ9CXF7 Gm38148-201ENSMUST00000195166 3012 ntBASIC11.34□□□□□ -0.59
Chd1lQ9CXF7 Pvr-201ENSMUST00000043517 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd1lQ9CXF7 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd1lQ9CXF7 Wdr62-201ENSMUST00000108190 4742 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd1lQ9CXF7 4930579F01Rik-202ENSMUST00000199293 1598 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Chd1lQ9CXF7 Ptpn21-201ENSMUST00000085116 5696 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd1lQ9CXF7 Shank2-205ENSMUST00000146006 7666 ntTSL 2 BASIC11.34□□□□□ -0.59
Chd1lQ9CXF7 Pax5-202ENSMUST00000102932 1460 ntTSL 5 BASIC11.34□□□□□ -0.59
Chd1lQ9CXF7 Acox3-201ENSMUST00000068563 3386 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd1lQ9CXF7 Ubash3b-206ENSMUST00000151485 2231 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Chd1lQ9CXF7 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Chd1lQ9CXF7 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Chd1lQ9CXF7 Bcas3-205ENSMUST00000108061 3810 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Chd1lQ9CXF7 Gm11919-201ENSMUST00000117609 721 ntBASIC11.34□□□□□ -0.59
Chd1lQ9CXF7 Gm15968-201ENSMUST00000119342 1168 ntBASIC11.34□□□□□ -0.59
Chd1lQ9CXF7 Gm12733-201ENSMUST00000119871 767 ntBASIC11.34□□□□□ -0.59
Chd1lQ9CXF7 Gm11701-201ENSMUST00000121277 1142 ntBASIC11.34□□□□□ -0.59
Chd1lQ9CXF7 1810058I24Rik-201ENSMUST00000130875 690 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Chd1lQ9CXF7 Gm16560-201ENSMUST00000159115 404 ntBASIC11.34□□□□□ -0.59
Chd1lQ9CXF7 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
Chd1lQ9CXF7 Gm20443-201ENSMUST00000173840 735 ntTSL 3 BASIC11.34□□□□□ -0.59
Chd1lQ9CXF7 Gm29157-201ENSMUST00000188753 612 ntBASIC11.34□□□□□ -0.59
Chd1lQ9CXF7 Gm33969-201ENSMUST00000197615 388 ntTSL 3 BASIC11.34□□□□□ -0.59
Chd1lQ9CXF7 Gm42660-201ENSMUST00000197733 947 ntBASIC11.34□□□□□ -0.59
Chd1lQ9CXF7 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC11.34□□□□□ -0.59
Chd1lQ9CXF7 Gm18123-201ENSMUST00000210874 822 ntBASIC11.34□□□□□ -0.59
Chd1lQ9CXF7 Gm18122-201ENSMUST00000211390 904 ntBASIC11.34□□□□□ -0.59
Chd1lQ9CXF7 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Chd1lQ9CXF7 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Chd1lQ9CXF7 Mir433-201ENSMUST00000093564 124 ntBASIC11.34□□□□□ -0.59
Chd1lQ9CXF7 Rpgrip1-213ENSMUST00000181401 3963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd1lQ9CXF7 Ccdc171-201ENSMUST00000053414 4525 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
Chd1lQ9CXF7 Olfr1424-202ENSMUST00000207681 1714 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Chd1lQ9CXF7 Heatr4-201ENSMUST00000164935 3038 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms