Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Nde1-202ENSMUST00000115795 2335 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Trim63Q38HM4 Pogz-204ENSMUST00000107269 5966 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
Trim63Q38HM4 Gm28175-202ENSMUST00000209336 1477 ntTSL 5 BASIC8.31□□□□□ -1.08
Trim63Q38HM4 Gm7086-201ENSMUST00000219083 1482 ntTSL 5 BASIC8.31□□□□□ -1.08
Trim63Q38HM4 5330413P13Rik-203ENSMUST00000150466 2173 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Trim63Q38HM4 Mat1a-201ENSMUST00000047286 3208 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim63Q38HM4 Nlrp3-201ENSMUST00000079476 3933 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim63Q38HM4 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim63Q38HM4 Prps2-201ENSMUST00000026839 3699 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim63Q38HM4 Gm16045-201ENSMUST00000123882 2969 ntTSL 5 BASIC8.31□□□□□ -1.08
Trim63Q38HM4 Cep170-201ENSMUST00000057037 6930 ntAPPRIS P2 TSL 5 BASIC8.31□□□□□ -1.08
Trim63Q38HM4 Cfap74-204ENSMUST00000123952 2365 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim63Q38HM4 Efcab12-203ENSMUST00000184428 2384 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Trim63Q38HM4 Nup210l-202ENSMUST00000200410 5710 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
Trim63Q38HM4 Gm3550-201ENSMUST00000105038 1656 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Trim63Q38HM4 Gm16485-201ENSMUST00000104915 3983 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Trim63Q38HM4 1600015I10Rik-201ENSMUST00000031837 2485 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim63Q38HM4 Aldh1l1-203ENSMUST00000130418 4175 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim63Q38HM4 Gm8464-201ENSMUST00000140208 2200 ntBASIC8.3□□□□□ -1.08
Trim63Q38HM4 Gm4750-202ENSMUST00000152262 2200 ntBASIC8.3□□□□□ -1.08
Trim63Q38HM4 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim63Q38HM4 Gm7961-201ENSMUST00000201338 1436 ntBASIC8.3□□□□□ -1.08
Trim63Q38HM4 Krtap16-1-201ENSMUST00000105050 1888 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Trim63Q38HM4 Gm37953-201ENSMUST00000195293 1884 ntBASIC8.3□□□□□ -1.08
Trim63Q38HM4 Gm10687-201ENSMUST00000180670 3233 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Trim63Q38HM4 Slc2a9-201ENSMUST00000005238 3243 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Trim63Q38HM4 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim63Q38HM4 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Trim63Q38HM4 4930433I11Rik-201ENSMUST00000171664 2424 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim63Q38HM4 Mical3-201ENSMUST00000077159 2875 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Trim63Q38HM4 Tmem167b-201ENSMUST00000090546 2864 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim63Q38HM4 Trub1-202ENSMUST00000026073 3795 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim63Q38HM4 BC025920-204ENSMUST00000121138 1611 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim63Q38HM4 Zhx3-201ENSMUST00000103111 9563 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim63Q38HM4 Prrg1-202ENSMUST00000114025 3964 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim63Q38HM4 Gm28177-201ENSMUST00000185516 3532 ntTSL 5 BASIC8.3□□□□□ -1.08
Trim63Q38HM4 Gm38252-201ENSMUST00000192701 2616 ntBASIC8.3□□□□□ -1.08
Trim63Q38HM4 Fam129a-205ENSMUST00000148810 6531 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim63Q38HM4 Top3a-201ENSMUST00000002891 3741 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim63Q38HM4 Col15a1-204ENSMUST00000107731 3253 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Trim63Q38HM4 Gm37266-201ENSMUST00000193802 2287 ntBASIC8.3□□□□□ -1.08
Trim63Q38HM4 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim63Q38HM4 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Trim63Q38HM4 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC8.3□□□□□ -1.08
Trim63Q38HM4 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC8.3□□□□□ -1.08
Trim63Q38HM4 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Trim63Q38HM4 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
Trim63Q38HM4 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim63Q38HM4 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC8.3□□□□□ -1.08
Trim63Q38HM4 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC8.3□□□□□ -1.08
Trim63Q38HM4 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Trim63Q38HM4 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Trim63Q38HM4 6820431F20Rik-201ENSMUST00000150051 936 ntBASIC8.3□□□□□ -1.08
Trim63Q38HM4 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Trim63Q38HM4 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC8.3□□□□□ -1.08
Trim63Q38HM4 Gm4310-201ENSMUST00000177847 889 ntBASIC8.3□□□□□ -1.08
Trim63Q38HM4 Gm6244-201ENSMUST00000178732 841 ntBASIC8.3□□□□□ -1.08
Trim63Q38HM4 Aldh3b3-202ENSMUST00000179433 3827 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Trim63Q38HM4 Gm16617-201ENSMUST00000181008 675 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Trim63Q38HM4 Gm7516-201ENSMUST00000186198 706 ntBASIC8.3□□□□□ -1.08
Trim63Q38HM4 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC8.3□□□□□ -1.08
Trim63Q38HM4 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC8.3□□□□□ -1.08
Trim63Q38HM4 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC8.3□□□□□ -1.08
Trim63Q38HM4 Gm45399-201ENSMUST00000209955 1016 ntBASIC8.3□□□□□ -1.08
Trim63Q38HM4 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Trim63Q38HM4 Olfr32-206ENSMUST00000215765 1241 ntAPPRIS P1 TSL 3 BASIC8.3□□□□□ -1.08
Trim63Q38HM4 Gm5626-201ENSMUST00000222151 1058 ntBASIC8.3□□□□□ -1.08
Trim63Q38HM4 AC154757.2-201ENSMUST00000228885 743 ntBASIC8.3□□□□□ -1.08
Trim63Q38HM4 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim63Q38HM4 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Trim63Q38HM4 Ap3b2-201ENSMUST00000082090 3804 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim63Q38HM4 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC8.3□□□□□ -1.08
Trim63Q38HM4 Vmn1r201-201ENSMUST00000091730 903 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Trim63Q38HM4 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Trim63Q38HM4 Gm21811-201ENSMUST00000096485 930 ntBASIC8.3□□□□□ -1.08
Trim63Q38HM4 Olfr32-201ENSMUST00000099755 1016 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Trim63Q38HM4 Arhgap21-213ENSMUST00000173194 6920 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim63Q38HM4 Gucd1-202ENSMUST00000118936 2843 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Trim63Q38HM4 Gpr83-202ENSMUST00000115624 2937 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Trim63Q38HM4 AA986860-201ENSMUST00000039323 2909 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim63Q38HM4 Gin1-201ENSMUST00000027571 2494 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Trim63Q38HM4 Pld5-201ENSMUST00000065967 3557 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim63Q38HM4 Ano9-201ENSMUST00000067836 3019 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Trim63Q38HM4 Gm15448-204ENSMUST00000153846 2145 ntAPPRIS P5 TSL 5 BASIC8.3□□□□□ -1.08
Trim63Q38HM4 Dclk1-212ENSMUST00000199585 5196 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Trim63Q38HM4 Paqr8-201ENSMUST00000068880 4704 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim63Q38HM4 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Trim63Q38HM4 Gm17137-201ENSMUST00000164106 4371 ntBASIC8.3□□□□□ -1.08
Trim63Q38HM4 Polr3c-206ENSMUST00000154679 2406 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Trim63Q38HM4 Akap13-205ENSMUST00000207750 12597 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
Trim63Q38HM4 CT010486.2-201ENSMUST00000224003 2714 ntBASIC8.3□□□□□ -1.08
Trim63Q38HM4 Synpo2-207ENSMUST00000198584 9203 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
Trim63Q38HM4 Sorbs1-202ENSMUST00000099467 2817 ntAPPRIS P4 TSL 5 BASIC8.3□□□□□ -1.08
Trim63Q38HM4 Dlg3-203ENSMUST00000113735 3692 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Trim63Q38HM4 Abcc12-201ENSMUST00000080115 4511 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim63Q38HM4 Gpr85-203ENSMUST00000115492 2182 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trim63Q38HM4 F730016J06Rik-201ENSMUST00000126140 1344 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Trim63Q38HM4 Nedd4-209ENSMUST00000184450 3329 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Trim63Q38HM4 St6galnac1-201ENSMUST00000009732 2392 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Trim63Q38HM4 4930509G22Rik-201ENSMUST00000181206 2481 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms