Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Vrk1-204ENSMUST00000220629 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Smg1Q8BKX6 Gm13564-201ENSMUST00000131533 657 ntTSL 3 BASIC8.33□□□□□ -1.08
Smg1Q8BKX6 Six3os1-213ENSMUST00000177487 537 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Smg1Q8BKX6 Gm30173-201ENSMUST00000195035 1128 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Smg1Q8BKX6 Prpmp5-201ENSMUST00000048686 1298 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Smg1Q8BKX6 AC126459.1-201ENSMUST00000214791 2123 ntBASIC8.33□□□□□ -1.08
Smg1Q8BKX6 Gbp3-201ENSMUST00000029935 2681 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Smg1Q8BKX6 Alox15-201ENSMUST00000019068 2409 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Smg1Q8BKX6 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Smg1Q8BKX6 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Smg1Q8BKX6 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Smg1Q8BKX6 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Smg1Q8BKX6 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Smg1Q8BKX6 Ucn3-201ENSMUST00000058610 1478 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Smg1Q8BKX6 Rerg-201ENSMUST00000032347 2075 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Smg1Q8BKX6 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Smg1Q8BKX6 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Smg1Q8BKX6 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Smg1Q8BKX6 Gm13326-201ENSMUST00000118730 1011 ntBASIC8.33□□□□□ -1.08
Smg1Q8BKX6 BC021767-202ENSMUST00000136988 905 ntTSL 3 BASIC8.33□□□□□ -1.08
Smg1Q8BKX6 Gm22484-201ENSMUST00000157992 306 ntBASIC8.33□□□□□ -1.08
Smg1Q8BKX6 Siglech-208ENSMUST00000173835 833 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Smg1Q8BKX6 Gm25736-201ENSMUST00000175165 101 ntBASIC8.33□□□□□ -1.08
Smg1Q8BKX6 Gm38114-201ENSMUST00000191877 1232 ntBASIC8.33□□□□□ -1.08
Smg1Q8BKX6 Gm38328-201ENSMUST00000195582 317 ntBASIC8.33□□□□□ -1.08
Smg1Q8BKX6 Gm5881-201ENSMUST00000204737 367 ntBASIC8.33□□□□□ -1.08
Smg1Q8BKX6 Gm11149-202ENSMUST00000215070 1169 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Smg1Q8BKX6 AC132384.1-201ENSMUST00000219908 1195 ntBASIC8.33□□□□□ -1.08
Smg1Q8BKX6 Olfr641-201ENSMUST00000098183 939 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Smg1Q8BKX6 Eif3c-201ENSMUST00000032992 3383 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Smg1Q8BKX6 Itsn1-204ENSMUST00000113993 3787 ntTSL 5 BASIC8.33□□□□□ -1.08
Smg1Q8BKX6 Gm42714-201ENSMUST00000202063 1364 ntBASIC8.33□□□□□ -1.08
Smg1Q8BKX6 Limk1-202ENSMUST00000111233 3109 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Smg1Q8BKX6 Glod4-209ENSMUST00000170710 1445 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Smg1Q8BKX6 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Smg1Q8BKX6 Slc25a14-204ENSMUST00000134257 1805 ntAPPRIS ALT1 TSL 5 BASIC8.33□□□□□ -1.08
Smg1Q8BKX6 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Smg1Q8BKX6 Tgfb1i1-201ENSMUST00000070656 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Smg1Q8BKX6 Atg4b-201ENSMUST00000027502 4173 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Smg1Q8BKX6 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Smg1Q8BKX6 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Smg1Q8BKX6 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Smg1Q8BKX6 Snhg7os-201ENSMUST00000126798 546 ntTSL 5 BASIC8.33□□□□□ -1.08
Smg1Q8BKX6 Olfr330-201ENSMUST00000134055 1134 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Smg1Q8BKX6 Taz-213ENSMUST00000135504 747 ntTSL 5 BASIC8.33□□□□□ -1.08
Smg1Q8BKX6 Gm26046-201ENSMUST00000157312 166 ntBASIC8.33□□□□□ -1.08
Smg1Q8BKX6 Gm36569-201ENSMUST00000195082 965 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Smg1Q8BKX6 Oaz3-206ENSMUST00000204548 787 ntTSL 5 BASIC8.33□□□□□ -1.08
Smg1Q8BKX6 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Smg1Q8BKX6 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Smg1Q8BKX6 Gm15651-201ENSMUST00000159953 2507 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Smg1Q8BKX6 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Smg1Q8BKX6 AC140299.1-201ENSMUST00000217855 1510 ntBASIC8.32□□□□□ -1.08
Smg1Q8BKX6 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Smg1Q8BKX6 Hmbox1-205ENSMUST00000176128 2958 ntAPPRIS ALT1 TSL 5 BASIC8.32□□□□□ -1.08
Smg1Q8BKX6 Dync1i1-201ENSMUST00000115554 2518 ntAPPRIS ALT1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Smg1Q8BKX6 Magea7-ps-201ENSMUST00000117727 960 ntBASIC8.32□□□□□ -1.08
Smg1Q8BKX6 Gm15368-201ENSMUST00000120438 858 ntBASIC8.32□□□□□ -1.08
Smg1Q8BKX6 Snhg12-201ENSMUST00000126380 890 ntTSL 2 BASIC8.32□□□□□ -1.08
Smg1Q8BKX6 Bud31-206ENSMUST00000162308 705 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Smg1Q8BKX6 Celrr-201ENSMUST00000181183 1194 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Smg1Q8BKX6 Gm8925-201ENSMUST00000197212 763 ntBASIC8.32□□□□□ -1.08
Smg1Q8BKX6 CT030664.1-201ENSMUST00000223639 908 ntBASIC8.32□□□□□ -1.08
Smg1Q8BKX6 Prp2-201ENSMUST00000076061 1074 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Smg1Q8BKX6 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Smg1Q8BKX6 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Smg1Q8BKX6 Gm46995-201ENSMUST00000223445 1378 ntBASIC8.32□□□□□ -1.08
Smg1Q8BKX6 Ctsa-201ENSMUST00000017904 3674 ntAPPRIS P4 TSL 5 BASIC8.32□□□□□ -1.08
Smg1Q8BKX6 Gm7052-201ENSMUST00000167568 1512 ntBASIC8.32□□□□□ -1.08
Smg1Q8BKX6 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
Smg1Q8BKX6 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC8.32□□□□□ -1.08
Smg1Q8BKX6 Gm26631-201ENSMUST00000181462 2505 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Smg1Q8BKX6 Tcp10a-203ENSMUST00000129709 1778 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Smg1Q8BKX6 Fam49a-205ENSMUST00000223061 1782 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Smg1Q8BKX6 Rrn3-201ENSMUST00000023363 3597 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Smg1Q8BKX6 Atg13-202ENSMUST00000076803 3551 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Smg1Q8BKX6 Gm8446-201ENSMUST00000188834 2712 ntBASIC8.32□□□□□ -1.08
Smg1Q8BKX6 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Smg1Q8BKX6 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC8.32□□□□□ -1.08
Smg1Q8BKX6 Gm26668-201ENSMUST00000181125 3635 ntTSL 5 BASIC8.32□□□□□ -1.08
Smg1Q8BKX6 Wfdc11-201ENSMUST00000109332 617 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Smg1Q8BKX6 Cfap100-205ENSMUST00000135757 289 ntTSL 5 BASIC8.32□□□□□ -1.08
Smg1Q8BKX6 Rnasek-203ENSMUST00000141880 465 ntTSL 2 BASIC8.32□□□□□ -1.08
Smg1Q8BKX6 Wfdc11-202ENSMUST00000167694 249 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Smg1Q8BKX6 Gm17233-201ENSMUST00000168470 698 ntTSL 3 BASIC8.32□□□□□ -1.08
Smg1Q8BKX6 Mir6360-201ENSMUST00000184278 126 ntBASIC8.32□□□□□ -1.08
Smg1Q8BKX6 1110002O04Rik-201ENSMUST00000194261 566 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Smg1Q8BKX6 Gm37144-201ENSMUST00000195445 1150 ntBASIC8.32□□□□□ -1.08
Smg1Q8BKX6 Gm17978-201ENSMUST00000195986 769 ntBASIC8.32□□□□□ -1.08
Smg1Q8BKX6 Fxyd4-208ENSMUST00000204950 586 ntTSL 3 BASIC8.32□□□□□ -1.08
Smg1Q8BKX6 Zfp809-205ENSMUST00000215618 1313 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Smg1Q8BKX6 Lipa-201ENSMUST00000049572 2969 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Smg1Q8BKX6 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Smg1Q8BKX6 Slc25a27-201ENSMUST00000024705 2687 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Smg1Q8BKX6 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Smg1Q8BKX6 Ighv1-82-201ENSMUST00000103549 294 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Smg1Q8BKX6 Gm25000-201ENSMUST00000117016 114 ntBASIC8.32□□□□□ -1.08
Smg1Q8BKX6 Gm11882-201ENSMUST00000121463 506 ntBASIC8.32□□□□□ -1.08
Smg1Q8BKX6 Wdr61-205ENSMUST00000130368 1162 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Smg1Q8BKX6 Gm15788-202ENSMUST00000140087 751 ntTSL 3 BASIC8.32□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 181.5 ms