Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Lsm3P62311 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC9.14□□□□□ -0.95
Lsm3P62311 Stk33-205ENSMUST00000141210 949 ntTSL 3 BASIC9.14□□□□□ -0.95
Lsm3P62311 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC9.14□□□□□ -0.95
Lsm3P62311 Aamdc-209ENSMUST00000144858 380 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Lsm3P62311 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Lsm3P62311 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
Lsm3P62311 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Lsm3P62311 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Lsm3P62311 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Lsm3P62311 Gm17709-201ENSMUST00000174536 1096 ntBASIC9.14□□□□□ -0.95
Lsm3P62311 Gm6498-201ENSMUST00000181413 1006 ntBASIC9.14□□□□□ -0.95
Lsm3P62311 Gm28857-201ENSMUST00000188068 425 ntTSL 3 BASIC9.14□□□□□ -0.95
Lsm3P62311 Gm5543-201ENSMUST00000193329 1091 ntBASIC9.14□□□□□ -0.95
Lsm3P62311 Gm37259-201ENSMUST00000193903 849 ntBASIC9.14□□□□□ -0.95
Lsm3P62311 Myo1h-206ENSMUST00000196467 1208 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Lsm3P62311 Gm6069-201ENSMUST00000196501 463 ntBASIC9.14□□□□□ -0.95
Lsm3P62311 Gm5869-201ENSMUST00000200248 1257 ntBASIC9.14□□□□□ -0.95
Lsm3P62311 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Lsm3P62311 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC9.14□□□□□ -0.95
Lsm3P62311 Id2-203ENSMUST00000222667 958 ntBASIC9.14□□□□□ -0.95
Lsm3P62311 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Lsm3P62311 Tceanc2-203ENSMUST00000058585 766 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Lsm3P62311 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Lsm3P62311 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC9.14□□□□□ -0.95
Lsm3P62311 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Lsm3P62311 Gm5451-201ENSMUST00000080545 579 ntBASIC9.14□□□□□ -0.95
Lsm3P62311 Gm31983-202ENSMUST00000210553 3155 ntTSL 5 BASIC9.14□□□□□ -0.95
Lsm3P62311 Gm45193-201ENSMUST00000204686 1552 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Lsm3P62311 Adgb-201ENSMUST00000045328 1893 ntTSL 2 BASIC9.14□□□□□ -0.95
Lsm3P62311 Cpsf3-201ENSMUST00000067284 2499 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Lsm3P62311 Cul4b-201ENSMUST00000016681 3354 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Lsm3P62311 Aplnr-201ENSMUST00000057019 3699 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Lsm3P62311 AC140393.1-202ENSMUST00000228347 1818 ntBASIC9.14□□□□□ -0.95
Lsm3P62311 Patj-205ENSMUST00000107030 2104 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Lsm3P62311 Arhgap12-201ENSMUST00000062584 2718 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Lsm3P62311 Pdgfd-202ENSMUST00000168039 1795 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Lsm3P62311 Jarid2-210ENSMUST00000173704 4135 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Lsm3P62311 Top3a-202ENSMUST00000102668 3542 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Lsm3P62311 Olfr531-202ENSMUST00000216053 2330 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Lsm3P62311 Akap1-202ENSMUST00000107903 3721 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Lsm3P62311 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Lsm3P62311 Prdx1-204ENSMUST00000135573 2294 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Lsm3P62311 Kcnip4-204ENSMUST00000166924 2257 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Lsm3P62311 Prdm16-202ENSMUST00000070313 8429 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Lsm3P62311 Samhd1-201ENSMUST00000057725 3926 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
Lsm3P62311 Itih1-201ENSMUST00000006704 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Lsm3P62311 Gm10790-202ENSMUST00000221285 1696 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Lsm3P62311 Sectm1a-201ENSMUST00000026162 1692 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Lsm3P62311 Cdh23-203ENSMUST00000105462 10592 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
Lsm3P62311 Olfr464-205ENSMUST00000217112 2232 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Lsm3P62311 Kcnj10-201ENSMUST00000056136 5407 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Lsm3P62311 Gm42735-201ENSMUST00000201718 1646 ntBASIC9.13□□□□□ -0.95
Lsm3P62311 Disp2-203ENSMUST00000110843 2949 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Lsm3P62311 Rabep1-206ENSMUST00000177731 3167 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Lsm3P62311 Gm15519-201ENSMUST00000120088 1566 ntBASIC9.13□□□□□ -0.95
Lsm3P62311 Aldh1l1-201ENSMUST00000032175 3052 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Lsm3P62311 Tusc5-201ENSMUST00000062024 3302 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Lsm3P62311 Arhgef3-201ENSMUST00000049206 3585 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Lsm3P62311 Bglap3-203ENSMUST00000107543 1047 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Lsm3P62311 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Lsm3P62311 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Lsm3P62311 Gm11380-201ENSMUST00000118067 560 ntBASIC9.13□□□□□ -0.95
Lsm3P62311 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Lsm3P62311 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Lsm3P62311 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Lsm3P62311 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC9.13□□□□□ -0.95
Lsm3P62311 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Lsm3P62311 Gm5905-201ENSMUST00000211731 580 ntBASIC9.13□□□□□ -0.95
Lsm3P62311 Arhgef33-209ENSMUST00000225223 714 ntBASIC9.13□□□□□ -0.95
Lsm3P62311 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Lsm3P62311 Mir194-2-201ENSMUST00000083648 86 ntBASIC9.13□□□□□ -0.95
Lsm3P62311 P2rx7-202ENSMUST00000086247 712 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Lsm3P62311 Dusp27-202ENSMUST00000192369 4045 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Lsm3P62311 Slc4a2-203ENSMUST00000115049 3924 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
Lsm3P62311 Kcnt1-215ENSMUST00000200434 3609 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
Lsm3P62311 Ctnnd1-218ENSMUST00000111692 6170 ntAPPRIS ALT1 TSL 5 BASIC9.13□□□□□ -0.95
Lsm3P62311 Micalcl-202ENSMUST00000051308 2399 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Lsm3P62311 Pcdh15-216ENSMUST00000131724 6322 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
Lsm3P62311 Trerf1-205ENSMUST00000190080 7045 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Lsm3P62311 Olfr282-203ENSMUST00000213608 1374 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Lsm3P62311 4930589L23Rik-201ENSMUST00000091023 1364 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Lsm3P62311 Itpripl1-202ENSMUST00000132773 3424 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Lsm3P62311 Pdgfra-202ENSMUST00000168162 6834 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Lsm3P62311 Thbs3-201ENSMUST00000029682 3190 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Lsm3P62311 Gm37521-201ENSMUST00000193177 2045 ntBASIC9.12□□□□□ -0.95
Lsm3P62311 Zfp131-203ENSMUST00000223722 3109 ntAPPRIS ALT2 BASIC9.12□□□□□ -0.95
Lsm3P62311 Mid1-205ENSMUST00000112105 3974 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Lsm3P62311 AC160405.2-201ENSMUST00000219008 1987 ntBASIC9.12□□□□□ -0.95
Lsm3P62311 Rreb1-203ENSMUST00000110238 7437 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Lsm3P62311 Sept2-213ENSMUST00000168776 3267 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Lsm3P62311 Scnn1a-207ENSMUST00000177329 2807 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Lsm3P62311 Gprc5c-202ENSMUST00000053361 3667 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Lsm3P62311 D630045J12Rik-206ENSMUST00000169256 10968 ntAPPRIS P2 TSL 5 BASIC9.12□□□□□ -0.95
Lsm3P62311 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC9.12□□□□□ -0.95
Lsm3P62311 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Lsm3P62311 Masp2-202ENSMUST00000105701 738 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Lsm3P62311 Gm13392-201ENSMUST00000117708 150 ntBASIC9.12□□□□□ -0.95
Lsm3P62311 Gm5944-201ENSMUST00000118182 1001 ntBASIC9.12□□□□□ -0.95
Lsm3P62311 Gm17376-201ENSMUST00000166016 84 ntBASIC9.12□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms