Protein–RNA interactions for Protein: W4VSP1

Speer3, MCG129800, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Speer3W4VSP1 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Speer3W4VSP1 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Speer3W4VSP1 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
Speer3W4VSP1 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Speer3W4VSP1 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Speer3W4VSP1 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Speer3W4VSP1 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Speer3W4VSP1 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Speer3W4VSP1 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Speer3W4VSP1 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Speer3W4VSP1 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Speer3W4VSP1 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Speer3W4VSP1 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Speer3W4VSP1 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
Speer3W4VSP1 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Speer3W4VSP1 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Speer3W4VSP1 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Speer3W4VSP1 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
Speer3W4VSP1 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Speer3W4VSP1 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.95■□□□□ 0.78
Speer3W4VSP1 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Speer3W4VSP1 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.95■□□□□ 0.78
Speer3W4VSP1 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Speer3W4VSP1 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Speer3W4VSP1 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.95■□□□□ 0.78
Speer3W4VSP1 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Speer3W4VSP1 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Speer3W4VSP1 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.95■□□□□ 0.78
Speer3W4VSP1 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.95■□□□□ 0.78
Speer3W4VSP1 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Speer3W4VSP1 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Speer3W4VSP1 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Speer3W4VSP1 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Speer3W4VSP1 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.94■□□□□ 0.78
Speer3W4VSP1 Rps24-207ENSMUST00000224568 714 ntBASIC19.94■□□□□ 0.78
Speer3W4VSP1 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Speer3W4VSP1 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.94■□□□□ 0.78
Speer3W4VSP1 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Speer3W4VSP1 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Speer3W4VSP1 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.93■□□□□ 0.78
Speer3W4VSP1 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Speer3W4VSP1 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Speer3W4VSP1 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Speer3W4VSP1 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Speer3W4VSP1 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Speer3W4VSP1 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.93■□□□□ 0.78
Speer3W4VSP1 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Speer3W4VSP1 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Speer3W4VSP1 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Speer3W4VSP1 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Speer3W4VSP1 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Speer3W4VSP1 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Speer3W4VSP1 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Speer3W4VSP1 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Speer3W4VSP1 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Speer3W4VSP1 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.91■□□□□ 0.78
Speer3W4VSP1 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Speer3W4VSP1 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Speer3W4VSP1 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Speer3W4VSP1 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.91■□□□□ 0.78
Speer3W4VSP1 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Speer3W4VSP1 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.91■□□□□ 0.78
Speer3W4VSP1 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Speer3W4VSP1 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Speer3W4VSP1 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Speer3W4VSP1 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Speer3W4VSP1 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Speer3W4VSP1 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.91■□□□□ 0.78
Speer3W4VSP1 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Speer3W4VSP1 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.9■□□□□ 0.78
Speer3W4VSP1 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.9■□□□□ 0.78
Speer3W4VSP1 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Speer3W4VSP1 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.9■□□□□ 0.78
Speer3W4VSP1 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.9■□□□□ 0.78
Speer3W4VSP1 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.9■□□□□ 0.78
Speer3W4VSP1 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Speer3W4VSP1 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Speer3W4VSP1 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Speer3W4VSP1 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Speer3W4VSP1 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Speer3W4VSP1 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Speer3W4VSP1 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Speer3W4VSP1 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Speer3W4VSP1 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Speer3W4VSP1 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Speer3W4VSP1 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.89■□□□□ 0.77
Speer3W4VSP1 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Speer3W4VSP1 Gm9959-201ENSMUST00000068277 390 ntBASIC19.89■□□□□ 0.77
Speer3W4VSP1 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Speer3W4VSP1 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Speer3W4VSP1 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Speer3W4VSP1 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Speer3W4VSP1 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Speer3W4VSP1 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Speer3W4VSP1 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Speer3W4VSP1 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Speer3W4VSP1 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Speer3W4VSP1 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Speer3W4VSP1 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Speer3W4VSP1 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.88■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms