Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PdfS4R2K0 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC15.04■□□□□ -0
PdfS4R2K0 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
PdfS4R2K0 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC15.04■□□□□ -0
PdfS4R2K0 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PdfS4R2K0 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
PdfS4R2K0 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
PdfS4R2K0 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PdfS4R2K0 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PdfS4R2K0 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PdfS4R2K0 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PdfS4R2K0 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
PdfS4R2K0 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PdfS4R2K0 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
PdfS4R2K0 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PdfS4R2K0 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC15.03■□□□□ -0
PdfS4R2K0 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
PdfS4R2K0 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC15.03■□□□□ -0
PdfS4R2K0 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PdfS4R2K0 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
PdfS4R2K0 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PdfS4R2K0 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
PdfS4R2K0 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PdfS4R2K0 AC158990.1-201ENSMUST00000221450 2016 ntBASIC15.03■□□□□ -0
PdfS4R2K0 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC15.03■□□□□ -0
PdfS4R2K0 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC15.03■□□□□ -0
PdfS4R2K0 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC15.03■□□□□ -0
PdfS4R2K0 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PdfS4R2K0 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC15.02■□□□□ -0
PdfS4R2K0 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PdfS4R2K0 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
PdfS4R2K0 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC15.02■□□□□ -0
PdfS4R2K0 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
PdfS4R2K0 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PdfS4R2K0 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
PdfS4R2K0 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
PdfS4R2K0 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC15.02□□□□□ -0.01
PdfS4R2K0 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PdfS4R2K0 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PdfS4R2K0 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
PdfS4R2K0 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PdfS4R2K0 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PdfS4R2K0 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PdfS4R2K0 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
PdfS4R2K0 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC15.01□□□□□ -0.01
PdfS4R2K0 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
PdfS4R2K0 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PdfS4R2K0 Gm5522-201ENSMUST00000189483 1242 ntBASIC15.01□□□□□ -0.01
PdfS4R2K0 Gm5131-201ENSMUST00000212776 1238 ntBASIC15.01□□□□□ -0.01
PdfS4R2K0 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PdfS4R2K0 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
PdfS4R2K0 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
PdfS4R2K0 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PdfS4R2K0 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PdfS4R2K0 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
PdfS4R2K0 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
PdfS4R2K0 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
PdfS4R2K0 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC15.01□□□□□ -0.01
PdfS4R2K0 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PdfS4R2K0 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
PdfS4R2K0 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
PdfS4R2K0 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
PdfS4R2K0 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
PdfS4R2K0 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC15□□□□□ -0.01
PdfS4R2K0 AC116713.1-201ENSMUST00000215074 430 ntBASIC15□□□□□ -0.01
PdfS4R2K0 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PdfS4R2K0 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PdfS4R2K0 AC122428.2-201ENSMUST00000216321 1832 ntBASIC15□□□□□ -0.01
PdfS4R2K0 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PdfS4R2K0 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC15□□□□□ -0.01
PdfS4R2K0 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PdfS4R2K0 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PdfS4R2K0 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC15□□□□□ -0.01
PdfS4R2K0 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC15□□□□□ -0.01
PdfS4R2K0 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
PdfS4R2K0 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC15□□□□□ -0.01
PdfS4R2K0 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PdfS4R2K0 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PdfS4R2K0 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
PdfS4R2K0 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PdfS4R2K0 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC14.99□□□□□ -0.01
PdfS4R2K0 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PdfS4R2K0 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PdfS4R2K0 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PdfS4R2K0 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PdfS4R2K0 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
PdfS4R2K0 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
PdfS4R2K0 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PdfS4R2K0 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
PdfS4R2K0 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PdfS4R2K0 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PdfS4R2K0 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PdfS4R2K0 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PdfS4R2K0 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
PdfS4R2K0 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
PdfS4R2K0 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC14.98□□□□□ -0.01
PdfS4R2K0 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
PdfS4R2K0 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC14.98□□□□□ -0.01
PdfS4R2K0 Nsd1-206ENSMUST00000224918 1001 ntBASIC14.98□□□□□ -0.01
PdfS4R2K0 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms