Protein–RNA interactions for Protein: S4R2D1

Gm5493, Predicted gene 5493, mousemouse

Predictions only

Length 92 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5493S4R2D1 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Gm5493S4R2D1 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm5493S4R2D1 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC16.7■□□□□ 0.26
Gm5493S4R2D1 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC16.7■□□□□ 0.26
Gm5493S4R2D1 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm5493S4R2D1 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm5493S4R2D1 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm5493S4R2D1 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm5493S4R2D1 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC16.69■□□□□ 0.26
Gm5493S4R2D1 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Gm5493S4R2D1 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm5493S4R2D1 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm5493S4R2D1 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm5493S4R2D1 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Gm5493S4R2D1 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Gm5493S4R2D1 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm5493S4R2D1 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm5493S4R2D1 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Gm5493S4R2D1 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gm5493S4R2D1 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gm5493S4R2D1 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gm5493S4R2D1 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gm5493S4R2D1 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gm5493S4R2D1 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Gm5493S4R2D1 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gm5493S4R2D1 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Gm5493S4R2D1 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Gm5493S4R2D1 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16.67■□□□□ 0.26
Gm5493S4R2D1 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gm5493S4R2D1 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Gm5493S4R2D1 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC16.67■□□□□ 0.26
Gm5493S4R2D1 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gm5493S4R2D1 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC16.67■□□□□ 0.26
Gm5493S4R2D1 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Gm5493S4R2D1 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gm5493S4R2D1 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gm5493S4R2D1 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Gm5493S4R2D1 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gm5493S4R2D1 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gm5493S4R2D1 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gm5493S4R2D1 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC16.66■□□□□ 0.26
Gm5493S4R2D1 Gm11687-201ENSMUST00000118911 886 ntBASIC16.66■□□□□ 0.26
Gm5493S4R2D1 AC151971.4-201ENSMUST00000214717 704 ntBASIC16.66■□□□□ 0.26
Gm5493S4R2D1 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gm5493S4R2D1 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gm5493S4R2D1 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gm5493S4R2D1 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gm5493S4R2D1 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gm5493S4R2D1 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gm5493S4R2D1 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gm5493S4R2D1 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gm5493S4R2D1 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm5493S4R2D1 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm5493S4R2D1 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC16.65■□□□□ 0.26
Gm5493S4R2D1 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC16.65■□□□□ 0.26
Gm5493S4R2D1 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Gm5493S4R2D1 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm5493S4R2D1 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Gm5493S4R2D1 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Gm5493S4R2D1 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Gm5493S4R2D1 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC16.65■□□□□ 0.26
Gm5493S4R2D1 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm5493S4R2D1 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC16.65■□□□□ 0.26
Gm5493S4R2D1 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Gm5493S4R2D1 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Gm5493S4R2D1 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm5493S4R2D1 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC16.64■□□□□ 0.25
Gm5493S4R2D1 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm5493S4R2D1 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Gm5493S4R2D1 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Gm5493S4R2D1 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Gm5493S4R2D1 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC16.64■□□□□ 0.25
Gm5493S4R2D1 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC16.64■□□□□ 0.25
Gm5493S4R2D1 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm5493S4R2D1 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gm5493S4R2D1 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC16.63■□□□□ 0.25
Gm5493S4R2D1 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gm5493S4R2D1 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gm5493S4R2D1 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gm5493S4R2D1 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gm5493S4R2D1 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC16.63■□□□□ 0.25
Gm5493S4R2D1 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gm5493S4R2D1 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Gm5493S4R2D1 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gm5493S4R2D1 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Gm5493S4R2D1 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
Gm5493S4R2D1 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.63■□□□□ 0.25
Gm5493S4R2D1 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gm5493S4R2D1 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gm5493S4R2D1 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gm5493S4R2D1 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gm5493S4R2D1 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gm5493S4R2D1 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gm5493S4R2D1 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gm5493S4R2D1 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gm5493S4R2D1 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gm5493S4R2D1 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC16.62■□□□□ 0.25
Gm5493S4R2D1 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gm5493S4R2D1 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gm5493S4R2D1 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms