Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ClcnkaQ9WUB7 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.12■□□□□ 0.49
ClcnkaQ9WUB7 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ClcnkaQ9WUB7 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ClcnkaQ9WUB7 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ClcnkaQ9WUB7 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ClcnkaQ9WUB7 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ClcnkaQ9WUB7 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
ClcnkaQ9WUB7 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.11■□□□□ 0.49
ClcnkaQ9WUB7 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC18.11■□□□□ 0.49
ClcnkaQ9WUB7 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.11■□□□□ 0.49
ClcnkaQ9WUB7 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ClcnkaQ9WUB7 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.11■□□□□ 0.49
ClcnkaQ9WUB7 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.11■□□□□ 0.49
ClcnkaQ9WUB7 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
ClcnkaQ9WUB7 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ClcnkaQ9WUB7 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ClcnkaQ9WUB7 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.11■□□□□ 0.49
ClcnkaQ9WUB7 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
ClcnkaQ9WUB7 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.11■□□□□ 0.49
ClcnkaQ9WUB7 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.1■□□□□ 0.49
ClcnkaQ9WUB7 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ClcnkaQ9WUB7 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.1■□□□□ 0.49
ClcnkaQ9WUB7 Gm13241-201ENSMUST00000094493 780 ntBASIC18.1■□□□□ 0.49
ClcnkaQ9WUB7 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ClcnkaQ9WUB7 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ClcnkaQ9WUB7 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
ClcnkaQ9WUB7 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ClcnkaQ9WUB7 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ClcnkaQ9WUB7 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ClcnkaQ9WUB7 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ClcnkaQ9WUB7 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
ClcnkaQ9WUB7 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
ClcnkaQ9WUB7 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
ClcnkaQ9WUB7 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
ClcnkaQ9WUB7 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ClcnkaQ9WUB7 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ClcnkaQ9WUB7 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ClcnkaQ9WUB7 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ClcnkaQ9WUB7 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ClcnkaQ9WUB7 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.49
ClcnkaQ9WUB7 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ClcnkaQ9WUB7 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ClcnkaQ9WUB7 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.08■□□□□ 0.48
ClcnkaQ9WUB7 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ClcnkaQ9WUB7 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ClcnkaQ9WUB7 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ClcnkaQ9WUB7 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
ClcnkaQ9WUB7 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ClcnkaQ9WUB7 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ClcnkaQ9WUB7 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
ClcnkaQ9WUB7 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ClcnkaQ9WUB7 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ClcnkaQ9WUB7 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ClcnkaQ9WUB7 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ClcnkaQ9WUB7 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ClcnkaQ9WUB7 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ClcnkaQ9WUB7 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
ClcnkaQ9WUB7 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ClcnkaQ9WUB7 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
ClcnkaQ9WUB7 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
ClcnkaQ9WUB7 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
ClcnkaQ9WUB7 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
ClcnkaQ9WUB7 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ClcnkaQ9WUB7 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
ClcnkaQ9WUB7 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.06■□□□□ 0.48
ClcnkaQ9WUB7 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ClcnkaQ9WUB7 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ClcnkaQ9WUB7 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ClcnkaQ9WUB7 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ClcnkaQ9WUB7 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
ClcnkaQ9WUB7 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.05■□□□□ 0.48
ClcnkaQ9WUB7 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ClcnkaQ9WUB7 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.05■□□□□ 0.48
ClcnkaQ9WUB7 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
ClcnkaQ9WUB7 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ClcnkaQ9WUB7 Gm21956-201ENSMUST00000179946 522 ntBASIC18.05■□□□□ 0.48
ClcnkaQ9WUB7 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ClcnkaQ9WUB7 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ClcnkaQ9WUB7 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ClcnkaQ9WUB7 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.04■□□□□ 0.48
ClcnkaQ9WUB7 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ClcnkaQ9WUB7 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
ClcnkaQ9WUB7 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.04■□□□□ 0.48
ClcnkaQ9WUB7 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ClcnkaQ9WUB7 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC18.04■□□□□ 0.48
ClcnkaQ9WUB7 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ClcnkaQ9WUB7 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ClcnkaQ9WUB7 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
ClcnkaQ9WUB7 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ClcnkaQ9WUB7 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ClcnkaQ9WUB7 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
ClcnkaQ9WUB7 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ClcnkaQ9WUB7 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
ClcnkaQ9WUB7 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ClcnkaQ9WUB7 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.03■□□□□ 0.48
ClcnkaQ9WUB7 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
ClcnkaQ9WUB7 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
ClcnkaQ9WUB7 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
ClcnkaQ9WUB7 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms