Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col13a1Q9R1N9 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Col13a1Q9R1N9 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col13a1Q9R1N9 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Col13a1Q9R1N9 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Col13a1Q9R1N9 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
Col13a1Q9R1N9 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Col13a1Q9R1N9 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col13a1Q9R1N9 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Col13a1Q9R1N9 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Col13a1Q9R1N9 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col13a1Q9R1N9 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Col13a1Q9R1N9 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col13a1Q9R1N9 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col13a1Q9R1N9 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col13a1Q9R1N9 Gm11421-201ENSMUST00000122124 294 ntBASIC16.71■□□□□ 0.27
Col13a1Q9R1N9 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Col13a1Q9R1N9 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col13a1Q9R1N9 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Col13a1Q9R1N9 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col13a1Q9R1N9 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col13a1Q9R1N9 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col13a1Q9R1N9 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Col13a1Q9R1N9 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Col13a1Q9R1N9 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col13a1Q9R1N9 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col13a1Q9R1N9 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col13a1Q9R1N9 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Col13a1Q9R1N9 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Col13a1Q9R1N9 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC16.7■□□□□ 0.26
Col13a1Q9R1N9 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Col13a1Q9R1N9 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
Col13a1Q9R1N9 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
Col13a1Q9R1N9 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col13a1Q9R1N9 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col13a1Q9R1N9 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col13a1Q9R1N9 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Col13a1Q9R1N9 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col13a1Q9R1N9 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col13a1Q9R1N9 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col13a1Q9R1N9 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col13a1Q9R1N9 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col13a1Q9R1N9 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col13a1Q9R1N9 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Col13a1Q9R1N9 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col13a1Q9R1N9 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC16.69■□□□□ 0.26
Col13a1Q9R1N9 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC16.69■□□□□ 0.26
Col13a1Q9R1N9 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Col13a1Q9R1N9 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Col13a1Q9R1N9 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC16.69■□□□□ 0.26
Col13a1Q9R1N9 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col13a1Q9R1N9 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
Col13a1Q9R1N9 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Col13a1Q9R1N9 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col13a1Q9R1N9 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC16.68■□□□□ 0.26
Col13a1Q9R1N9 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col13a1Q9R1N9 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col13a1Q9R1N9 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col13a1Q9R1N9 AC158538.1-201ENSMUST00000225870 294 ntBASIC16.68■□□□□ 0.26
Col13a1Q9R1N9 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col13a1Q9R1N9 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Col13a1Q9R1N9 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Col13a1Q9R1N9 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
Col13a1Q9R1N9 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Col13a1Q9R1N9 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col13a1Q9R1N9 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col13a1Q9R1N9 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col13a1Q9R1N9 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col13a1Q9R1N9 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col13a1Q9R1N9 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Col13a1Q9R1N9 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC16.67■□□□□ 0.26
Col13a1Q9R1N9 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
Col13a1Q9R1N9 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col13a1Q9R1N9 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Col13a1Q9R1N9 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col13a1Q9R1N9 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Col13a1Q9R1N9 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col13a1Q9R1N9 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Col13a1Q9R1N9 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col13a1Q9R1N9 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Col13a1Q9R1N9 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col13a1Q9R1N9 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Col13a1Q9R1N9 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC16.66■□□□□ 0.26
Col13a1Q9R1N9 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC16.66■□□□□ 0.26
Col13a1Q9R1N9 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC16.66■□□□□ 0.26
Col13a1Q9R1N9 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col13a1Q9R1N9 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col13a1Q9R1N9 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col13a1Q9R1N9 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col13a1Q9R1N9 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col13a1Q9R1N9 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col13a1Q9R1N9 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col13a1Q9R1N9 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col13a1Q9R1N9 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col13a1Q9R1N9 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col13a1Q9R1N9 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col13a1Q9R1N9 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Col13a1Q9R1N9 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Col13a1Q9R1N9 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC16.65■□□□□ 0.26
Col13a1Q9R1N9 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms