Protein–RNA interactions for Protein: Q9R1A8

Rfwd2, E3 ubiquitin-protein ligase RFWD2, mousemouse

Known RBP Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd2Q9R1A8 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rfwd2Q9R1A8 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Rfwd2Q9R1A8 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rfwd2Q9R1A8 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Rfwd2Q9R1A8 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rfwd2Q9R1A8 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Rfwd2Q9R1A8 Gm15820-201ENSMUST00000201566 728 ntBASIC20.25■□□□□ 0.83
Rfwd2Q9R1A8 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rfwd2Q9R1A8 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rfwd2Q9R1A8 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rfwd2Q9R1A8 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rfwd2Q9R1A8 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.25■□□□□ 0.83
Rfwd2Q9R1A8 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rfwd2Q9R1A8 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Rfwd2Q9R1A8 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Rfwd2Q9R1A8 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Rfwd2Q9R1A8 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.24■□□□□ 0.83
Rfwd2Q9R1A8 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.24■□□□□ 0.83
Rfwd2Q9R1A8 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.24■□□□□ 0.83
Rfwd2Q9R1A8 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rfwd2Q9R1A8 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Rfwd2Q9R1A8 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rfwd2Q9R1A8 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rfwd2Q9R1A8 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rfwd2Q9R1A8 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rfwd2Q9R1A8 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Rfwd2Q9R1A8 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rfwd2Q9R1A8 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rfwd2Q9R1A8 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rfwd2Q9R1A8 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.22■□□□□ 0.83
Rfwd2Q9R1A8 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rfwd2Q9R1A8 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Rfwd2Q9R1A8 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rfwd2Q9R1A8 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rfwd2Q9R1A8 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.21■□□□□ 0.83
Rfwd2Q9R1A8 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rfwd2Q9R1A8 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rfwd2Q9R1A8 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rfwd2Q9R1A8 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rfwd2Q9R1A8 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rfwd2Q9R1A8 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rfwd2Q9R1A8 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Rfwd2Q9R1A8 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rfwd2Q9R1A8 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rfwd2Q9R1A8 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rfwd2Q9R1A8 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.2■□□□□ 0.82
Rfwd2Q9R1A8 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rfwd2Q9R1A8 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rfwd2Q9R1A8 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.2■□□□□ 0.82
Rfwd2Q9R1A8 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rfwd2Q9R1A8 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
Rfwd2Q9R1A8 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rfwd2Q9R1A8 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.19■□□□□ 0.82
Rfwd2Q9R1A8 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC20.19■□□□□ 0.82
Rfwd2Q9R1A8 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rfwd2Q9R1A8 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Rfwd2Q9R1A8 Gm15546-201ENSMUST00000122095 826 ntBASIC20.19■□□□□ 0.82
Rfwd2Q9R1A8 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.19■□□□□ 0.82
Rfwd2Q9R1A8 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.19■□□□□ 0.82
Rfwd2Q9R1A8 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rfwd2Q9R1A8 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC20.19■□□□□ 0.82
Rfwd2Q9R1A8 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rfwd2Q9R1A8 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.19■□□□□ 0.82
Rfwd2Q9R1A8 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rfwd2Q9R1A8 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Rfwd2Q9R1A8 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rfwd2Q9R1A8 Golph3-205ENSMUST00000228671 2842 ntBASIC20.18■□□□□ 0.82
Rfwd2Q9R1A8 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rfwd2Q9R1A8 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rfwd2Q9R1A8 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Rfwd2Q9R1A8 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.18■□□□□ 0.82
Rfwd2Q9R1A8 Gm40881-201ENSMUST00000223397 166 ntBASIC20.18■□□□□ 0.82
Rfwd2Q9R1A8 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rfwd2Q9R1A8 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rfwd2Q9R1A8 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rfwd2Q9R1A8 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rfwd2Q9R1A8 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rfwd2Q9R1A8 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rfwd2Q9R1A8 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Rfwd2Q9R1A8 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rfwd2Q9R1A8 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rfwd2Q9R1A8 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rfwd2Q9R1A8 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.17■□□□□ 0.82
Rfwd2Q9R1A8 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Rfwd2Q9R1A8 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.17■□□□□ 0.82
Rfwd2Q9R1A8 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rfwd2Q9R1A8 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
Rfwd2Q9R1A8 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rfwd2Q9R1A8 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rfwd2Q9R1A8 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rfwd2Q9R1A8 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Rfwd2Q9R1A8 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Rfwd2Q9R1A8 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.16■□□□□ 0.82
Rfwd2Q9R1A8 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Rfwd2Q9R1A8 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Rfwd2Q9R1A8 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rfwd2Q9R1A8 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rfwd2Q9R1A8 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rfwd2Q9R1A8 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rfwd2Q9R1A8 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms