Protein–RNA interactions for Protein: Q9R0A1

Clcn2, Chloride channel protein 2, mousemouse

Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn2Q9R0A1 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Clcn2Q9R0A1 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Clcn2Q9R0A1 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Clcn2Q9R0A1 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Clcn2Q9R0A1 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
Clcn2Q9R0A1 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Clcn2Q9R0A1 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Clcn2Q9R0A1 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.12■□□□□ 0.81
Clcn2Q9R0A1 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.12■□□□□ 0.81
Clcn2Q9R0A1 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Clcn2Q9R0A1 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Clcn2Q9R0A1 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Clcn2Q9R0A1 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Clcn2Q9R0A1 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Clcn2Q9R0A1 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Clcn2Q9R0A1 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
Clcn2Q9R0A1 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Clcn2Q9R0A1 Gm21956-201ENSMUST00000179946 522 ntBASIC20.11■□□□□ 0.81
Clcn2Q9R0A1 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC20.11■□□□□ 0.81
Clcn2Q9R0A1 Gm7143-201ENSMUST00000222811 859 ntBASIC20.11■□□□□ 0.81
Clcn2Q9R0A1 Gm9847-201ENSMUST00000052528 599 ntBASIC20.11■□□□□ 0.81
Clcn2Q9R0A1 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Clcn2Q9R0A1 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Clcn2Q9R0A1 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Clcn2Q9R0A1 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Clcn2Q9R0A1 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Clcn2Q9R0A1 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.1■□□□□ 0.81
Clcn2Q9R0A1 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Clcn2Q9R0A1 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Clcn2Q9R0A1 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Clcn2Q9R0A1 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Clcn2Q9R0A1 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Clcn2Q9R0A1 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Clcn2Q9R0A1 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Clcn2Q9R0A1 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Clcn2Q9R0A1 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.09■□□□□ 0.81
Clcn2Q9R0A1 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.09■□□□□ 0.81
Clcn2Q9R0A1 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Clcn2Q9R0A1 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Clcn2Q9R0A1 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Clcn2Q9R0A1 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Clcn2Q9R0A1 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Clcn2Q9R0A1 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Clcn2Q9R0A1 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Clcn2Q9R0A1 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.08■□□□□ 0.81
Clcn2Q9R0A1 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Clcn2Q9R0A1 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Clcn2Q9R0A1 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.8
Clcn2Q9R0A1 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Clcn2Q9R0A1 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Clcn2Q9R0A1 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Clcn2Q9R0A1 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Clcn2Q9R0A1 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Clcn2Q9R0A1 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Clcn2Q9R0A1 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Clcn2Q9R0A1 Golgb1-201ENSMUST00000023534 498 ntBASIC20.07■□□□□ 0.8
Clcn2Q9R0A1 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Clcn2Q9R0A1 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.07■□□□□ 0.8
Clcn2Q9R0A1 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Clcn2Q9R0A1 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
Clcn2Q9R0A1 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.06■□□□□ 0.8
Clcn2Q9R0A1 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Clcn2Q9R0A1 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Clcn2Q9R0A1 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
Clcn2Q9R0A1 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Clcn2Q9R0A1 Gm13241-201ENSMUST00000094493 780 ntBASIC20.06■□□□□ 0.8
Clcn2Q9R0A1 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clcn2Q9R0A1 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Clcn2Q9R0A1 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Clcn2Q9R0A1 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Clcn2Q9R0A1 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Clcn2Q9R0A1 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.05■□□□□ 0.8
Clcn2Q9R0A1 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Clcn2Q9R0A1 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clcn2Q9R0A1 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Clcn2Q9R0A1 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clcn2Q9R0A1 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clcn2Q9R0A1 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clcn2Q9R0A1 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clcn2Q9R0A1 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clcn2Q9R0A1 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Clcn2Q9R0A1 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Clcn2Q9R0A1 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Clcn2Q9R0A1 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Clcn2Q9R0A1 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Clcn2Q9R0A1 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Clcn2Q9R0A1 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Clcn2Q9R0A1 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Clcn2Q9R0A1 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Clcn2Q9R0A1 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Clcn2Q9R0A1 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Clcn2Q9R0A1 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.03■□□□□ 0.8
Clcn2Q9R0A1 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.03■□□□□ 0.8
Clcn2Q9R0A1 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.03■□□□□ 0.8
Clcn2Q9R0A1 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
Clcn2Q9R0A1 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Clcn2Q9R0A1 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Clcn2Q9R0A1 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Clcn2Q9R0A1 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Clcn2Q9R0A1 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 79.7 ms