Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sec61a2Q9JLR1 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sec61a2Q9JLR1 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sec61a2Q9JLR1 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Sec61a2Q9JLR1 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sec61a2Q9JLR1 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sec61a2Q9JLR1 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sec61a2Q9JLR1 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sec61a2Q9JLR1 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC17.68■□□□□ 0.42
Sec61a2Q9JLR1 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC17.68■□□□□ 0.42
Sec61a2Q9JLR1 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.68■□□□□ 0.42
Sec61a2Q9JLR1 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sec61a2Q9JLR1 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Sec61a2Q9JLR1 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC17.68■□□□□ 0.42
Sec61a2Q9JLR1 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Sec61a2Q9JLR1 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Sec61a2Q9JLR1 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Sec61a2Q9JLR1 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC17.68■□□□□ 0.42
Sec61a2Q9JLR1 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sec61a2Q9JLR1 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Sec61a2Q9JLR1 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Sec61a2Q9JLR1 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Sec61a2Q9JLR1 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sec61a2Q9JLR1 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sec61a2Q9JLR1 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sec61a2Q9JLR1 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sec61a2Q9JLR1 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sec61a2Q9JLR1 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Sec61a2Q9JLR1 Gm12922-201ENSMUST00000120626 809 ntBASIC17.67■□□□□ 0.42
Sec61a2Q9JLR1 Gm10657-201ENSMUST00000193528 1031 ntBASIC17.67■□□□□ 0.42
Sec61a2Q9JLR1 Gm43530-201ENSMUST00000195920 274 ntBASIC17.67■□□□□ 0.42
Sec61a2Q9JLR1 Golgb1-201ENSMUST00000023534 498 ntBASIC17.67■□□□□ 0.42
Sec61a2Q9JLR1 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sec61a2Q9JLR1 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sec61a2Q9JLR1 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sec61a2Q9JLR1 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sec61a2Q9JLR1 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sec61a2Q9JLR1 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sec61a2Q9JLR1 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sec61a2Q9JLR1 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Sec61a2Q9JLR1 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Sec61a2Q9JLR1 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sec61a2Q9JLR1 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Sec61a2Q9JLR1 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC17.66■□□□□ 0.42
Sec61a2Q9JLR1 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC17.66■□□□□ 0.42
Sec61a2Q9JLR1 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Sec61a2Q9JLR1 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sec61a2Q9JLR1 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sec61a2Q9JLR1 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sec61a2Q9JLR1 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Sec61a2Q9JLR1 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sec61a2Q9JLR1 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Sec61a2Q9JLR1 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.65■□□□□ 0.42
Sec61a2Q9JLR1 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sec61a2Q9JLR1 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sec61a2Q9JLR1 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sec61a2Q9JLR1 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Sec61a2Q9JLR1 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sec61a2Q9JLR1 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Sec61a2Q9JLR1 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sec61a2Q9JLR1 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sec61a2Q9JLR1 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Sec61a2Q9JLR1 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.65■□□□□ 0.42
Sec61a2Q9JLR1 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sec61a2Q9JLR1 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Sec61a2Q9JLR1 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC17.64■□□□□ 0.42
Sec61a2Q9JLR1 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Sec61a2Q9JLR1 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC17.64■□□□□ 0.41
Sec61a2Q9JLR1 Gm13241-201ENSMUST00000094493 780 ntBASIC17.64■□□□□ 0.41
Sec61a2Q9JLR1 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sec61a2Q9JLR1 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17.64■□□□□ 0.41
Sec61a2Q9JLR1 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Sec61a2Q9JLR1 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC17.63■□□□□ 0.41
Sec61a2Q9JLR1 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sec61a2Q9JLR1 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sec61a2Q9JLR1 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sec61a2Q9JLR1 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC17.63■□□□□ 0.41
Sec61a2Q9JLR1 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC17.63■□□□□ 0.41
Sec61a2Q9JLR1 AC140930.3-201ENSMUST00000222935 274 ntBASIC17.63■□□□□ 0.41
Sec61a2Q9JLR1 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sec61a2Q9JLR1 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Sec61a2Q9JLR1 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Sec61a2Q9JLR1 Gm43034-201ENSMUST00000198678 1364 ntBASIC17.63■□□□□ 0.41
Sec61a2Q9JLR1 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sec61a2Q9JLR1 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sec61a2Q9JLR1 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Sec61a2Q9JLR1 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sec61a2Q9JLR1 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Sec61a2Q9JLR1 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC17.62■□□□□ 0.41
Sec61a2Q9JLR1 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC17.62■□□□□ 0.41
Sec61a2Q9JLR1 Mir6236-201ENSMUST00000184437 123 ntBASIC17.62■□□□□ 0.41
Sec61a2Q9JLR1 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC17.62■□□□□ 0.41
Sec61a2Q9JLR1 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sec61a2Q9JLR1 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Sec61a2Q9JLR1 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sec61a2Q9JLR1 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sec61a2Q9JLR1 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sec61a2Q9JLR1 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sec61a2Q9JLR1 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Sec61a2Q9JLR1 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms