Protein–RNA interactions for Protein: Q9JJ43

Rbfox1, RNA binding protein fox-1 homolog 1, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbfox1Q9JJ43 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rbfox1Q9JJ43 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rbfox1Q9JJ43 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rbfox1Q9JJ43 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rbfox1Q9JJ43 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rbfox1Q9JJ43 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rbfox1Q9JJ43 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rbfox1Q9JJ43 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rbfox1Q9JJ43 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC16.76■□□□□ 0.27
Rbfox1Q9JJ43 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC16.76■□□□□ 0.27
Rbfox1Q9JJ43 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Rbfox1Q9JJ43 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rbfox1Q9JJ43 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rbfox1Q9JJ43 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rbfox1Q9JJ43 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rbfox1Q9JJ43 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rbfox1Q9JJ43 Cdkn3-203ENSMUST00000227149 1952 ntBASIC16.75■□□□□ 0.27
Rbfox1Q9JJ43 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rbfox1Q9JJ43 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rbfox1Q9JJ43 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rbfox1Q9JJ43 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rbfox1Q9JJ43 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rbfox1Q9JJ43 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rbfox1Q9JJ43 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rbfox1Q9JJ43 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC16.75■□□□□ 0.27
Rbfox1Q9JJ43 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC16.75■□□□□ 0.27
Rbfox1Q9JJ43 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rbfox1Q9JJ43 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rbfox1Q9JJ43 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC16.75■□□□□ 0.27
Rbfox1Q9JJ43 Gm43545-201ENSMUST00000196765 2779 ntBASIC16.75■□□□□ 0.27
Rbfox1Q9JJ43 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC16.75■□□□□ 0.27
Rbfox1Q9JJ43 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rbfox1Q9JJ43 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rbfox1Q9JJ43 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rbfox1Q9JJ43 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Rbfox1Q9JJ43 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rbfox1Q9JJ43 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rbfox1Q9JJ43 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC16.73■□□□□ 0.27
Rbfox1Q9JJ43 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Rbfox1Q9JJ43 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rbfox1Q9JJ43 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rbfox1Q9JJ43 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rbfox1Q9JJ43 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Rbfox1Q9JJ43 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rbfox1Q9JJ43 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rbfox1Q9JJ43 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Rbfox1Q9JJ43 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.73■□□□□ 0.27
Rbfox1Q9JJ43 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Rbfox1Q9JJ43 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC16.72■□□□□ 0.27
Rbfox1Q9JJ43 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rbfox1Q9JJ43 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Rbfox1Q9JJ43 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Rbfox1Q9JJ43 Gm7417-201ENSMUST00000192950 473 ntBASIC16.72■□□□□ 0.27
Rbfox1Q9JJ43 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rbfox1Q9JJ43 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rbfox1Q9JJ43 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rbfox1Q9JJ43 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rbfox1Q9JJ43 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rbfox1Q9JJ43 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rbfox1Q9JJ43 Gm43182-201ENSMUST00000199476 2528 ntBASIC16.71■□□□□ 0.27
Rbfox1Q9JJ43 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rbfox1Q9JJ43 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rbfox1Q9JJ43 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rbfox1Q9JJ43 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rbfox1Q9JJ43 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rbfox1Q9JJ43 Etf1-202ENSMUST00000180351 108 ntBASIC16.71■□□□□ 0.27
Rbfox1Q9JJ43 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Rbfox1Q9JJ43 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC16.7■□□□□ 0.26
Rbfox1Q9JJ43 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC16.7■□□□□ 0.26
Rbfox1Q9JJ43 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rbfox1Q9JJ43 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rbfox1Q9JJ43 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rbfox1Q9JJ43 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC16.7■□□□□ 0.26
Rbfox1Q9JJ43 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rbfox1Q9JJ43 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC16.7■□□□□ 0.26
Rbfox1Q9JJ43 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Rbfox1Q9JJ43 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rbfox1Q9JJ43 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rbfox1Q9JJ43 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rbfox1Q9JJ43 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rbfox1Q9JJ43 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rbfox1Q9JJ43 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rbfox1Q9JJ43 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Rbfox1Q9JJ43 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rbfox1Q9JJ43 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rbfox1Q9JJ43 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rbfox1Q9JJ43 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC16.69■□□□□ 0.26
Rbfox1Q9JJ43 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC16.69■□□□□ 0.26
Rbfox1Q9JJ43 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC16.69■□□□□ 0.26
Rbfox1Q9JJ43 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rbfox1Q9JJ43 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC16.69■□□□□ 0.26
Rbfox1Q9JJ43 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rbfox1Q9JJ43 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rbfox1Q9JJ43 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rbfox1Q9JJ43 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
Rbfox1Q9JJ43 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Rbfox1Q9JJ43 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rbfox1Q9JJ43 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rbfox1Q9JJ43 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rbfox1Q9JJ43 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms