Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Vps35Q9EQH3 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vps35Q9EQH3 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vps35Q9EQH3 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.71■□□□□ 0.75
Vps35Q9EQH3 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vps35Q9EQH3 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vps35Q9EQH3 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vps35Q9EQH3 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vps35Q9EQH3 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Vps35Q9EQH3 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.7■□□□□ 0.74
Vps35Q9EQH3 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Vps35Q9EQH3 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.7■□□□□ 0.74
Vps35Q9EQH3 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vps35Q9EQH3 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Vps35Q9EQH3 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Vps35Q9EQH3 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
Vps35Q9EQH3 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vps35Q9EQH3 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vps35Q9EQH3 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vps35Q9EQH3 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vps35Q9EQH3 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Vps35Q9EQH3 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vps35Q9EQH3 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vps35Q9EQH3 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Vps35Q9EQH3 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Vps35Q9EQH3 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Vps35Q9EQH3 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Vps35Q9EQH3 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Vps35Q9EQH3 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Vps35Q9EQH3 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vps35Q9EQH3 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vps35Q9EQH3 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Vps35Q9EQH3 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vps35Q9EQH3 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vps35Q9EQH3 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Vps35Q9EQH3 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Vps35Q9EQH3 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vps35Q9EQH3 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Vps35Q9EQH3 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Vps35Q9EQH3 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vps35Q9EQH3 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vps35Q9EQH3 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vps35Q9EQH3 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vps35Q9EQH3 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Vps35Q9EQH3 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Vps35Q9EQH3 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vps35Q9EQH3 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vps35Q9EQH3 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
Vps35Q9EQH3 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.66■□□□□ 0.74
Vps35Q9EQH3 Gm45417-201ENSMUST00000209533 758 ntBASIC19.66■□□□□ 0.74
Vps35Q9EQH3 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vps35Q9EQH3 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vps35Q9EQH3 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
Vps35Q9EQH3 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vps35Q9EQH3 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vps35Q9EQH3 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vps35Q9EQH3 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Vps35Q9EQH3 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Vps35Q9EQH3 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Vps35Q9EQH3 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Vps35Q9EQH3 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vps35Q9EQH3 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Vps35Q9EQH3 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.65■□□□□ 0.74
Vps35Q9EQH3 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Vps35Q9EQH3 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.64■□□□□ 0.74
Vps35Q9EQH3 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Vps35Q9EQH3 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.64■□□□□ 0.73
Vps35Q9EQH3 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Vps35Q9EQH3 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Vps35Q9EQH3 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Vps35Q9EQH3 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vps35Q9EQH3 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Vps35Q9EQH3 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vps35Q9EQH3 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Vps35Q9EQH3 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vps35Q9EQH3 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vps35Q9EQH3 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vps35Q9EQH3 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Vps35Q9EQH3 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vps35Q9EQH3 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Vps35Q9EQH3 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Vps35Q9EQH3 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19.63■□□□□ 0.73
Vps35Q9EQH3 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vps35Q9EQH3 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vps35Q9EQH3 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vps35Q9EQH3 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vps35Q9EQH3 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vps35Q9EQH3 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.62■□□□□ 0.73
Vps35Q9EQH3 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vps35Q9EQH3 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Vps35Q9EQH3 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vps35Q9EQH3 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
Vps35Q9EQH3 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Vps35Q9EQH3 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Vps35Q9EQH3 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vps35Q9EQH3 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.62■□□□□ 0.73
Vps35Q9EQH3 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vps35Q9EQH3 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.61■□□□□ 0.73
Vps35Q9EQH3 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.61■□□□□ 0.73
Vps35Q9EQH3 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms