Protein–RNA interactions for Protein: Q9EPL6

Mmp1b, Interstitial collagenase B, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp1bQ9EPL6 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mmp1bQ9EPL6 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mmp1bQ9EPL6 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mmp1bQ9EPL6 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mmp1bQ9EPL6 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mmp1bQ9EPL6 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Mmp1bQ9EPL6 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp1bQ9EPL6 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp1bQ9EPL6 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp1bQ9EPL6 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp1bQ9EPL6 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp1bQ9EPL6 Gm10399-202ENSMUST00000202768 748 ntBASIC17.31■□□□□ 0.36
Mmp1bQ9EPL6 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp1bQ9EPL6 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp1bQ9EPL6 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp1bQ9EPL6 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Mmp1bQ9EPL6 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.31■□□□□ 0.36
Mmp1bQ9EPL6 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp1bQ9EPL6 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp1bQ9EPL6 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp1bQ9EPL6 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp1bQ9EPL6 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mmp1bQ9EPL6 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mmp1bQ9EPL6 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mmp1bQ9EPL6 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mmp1bQ9EPL6 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC17.3■□□□□ 0.36
Mmp1bQ9EPL6 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
Mmp1bQ9EPL6 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.3■□□□□ 0.36
Mmp1bQ9EPL6 Golph3-205ENSMUST00000228671 2842 ntBASIC17.3■□□□□ 0.36
Mmp1bQ9EPL6 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Mmp1bQ9EPL6 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mmp1bQ9EPL6 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mmp1bQ9EPL6 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mmp1bQ9EPL6 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mmp1bQ9EPL6 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mmp1bQ9EPL6 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mmp1bQ9EPL6 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Mmp1bQ9EPL6 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mmp1bQ9EPL6 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mmp1bQ9EPL6 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mmp1bQ9EPL6 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mmp1bQ9EPL6 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mmp1bQ9EPL6 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.29■□□□□ 0.36
Mmp1bQ9EPL6 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Mmp1bQ9EPL6 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mmp1bQ9EPL6 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mmp1bQ9EPL6 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mmp1bQ9EPL6 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
Mmp1bQ9EPL6 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mmp1bQ9EPL6 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Mmp1bQ9EPL6 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mmp1bQ9EPL6 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Mmp1bQ9EPL6 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mmp1bQ9EPL6 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mmp1bQ9EPL6 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mmp1bQ9EPL6 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mmp1bQ9EPL6 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mmp1bQ9EPL6 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mmp1bQ9EPL6 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Mmp1bQ9EPL6 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Mmp1bQ9EPL6 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Mmp1bQ9EPL6 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Mmp1bQ9EPL6 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Mmp1bQ9EPL6 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Mmp1bQ9EPL6 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC17.27■□□□□ 0.36
Mmp1bQ9EPL6 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC17.27■□□□□ 0.36
Mmp1bQ9EPL6 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC17.27■□□□□ 0.36
Mmp1bQ9EPL6 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC17.27■□□□□ 0.36
Mmp1bQ9EPL6 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Mmp1bQ9EPL6 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Mmp1bQ9EPL6 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Mmp1bQ9EPL6 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Mmp1bQ9EPL6 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Mmp1bQ9EPL6 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.27■□□□□ 0.35
Mmp1bQ9EPL6 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Mmp1bQ9EPL6 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.27■□□□□ 0.35
Mmp1bQ9EPL6 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mmp1bQ9EPL6 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mmp1bQ9EPL6 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mmp1bQ9EPL6 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Mmp1bQ9EPL6 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mmp1bQ9EPL6 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Mmp1bQ9EPL6 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mmp1bQ9EPL6 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mmp1bQ9EPL6 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mmp1bQ9EPL6 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Mmp1bQ9EPL6 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mmp1bQ9EPL6 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mmp1bQ9EPL6 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mmp1bQ9EPL6 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mmp1bQ9EPL6 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Mmp1bQ9EPL6 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC17.25■□□□□ 0.35
Mmp1bQ9EPL6 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Mmp1bQ9EPL6 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Mmp1bQ9EPL6 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mmp1bQ9EPL6 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Mmp1bQ9EPL6 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mmp1bQ9EPL6 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mmp1bQ9EPL6 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Mmp1bQ9EPL6 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms