Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hmgn3Q9DCB1 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.5■□□□□ 0.55
Hmgn3Q9DCB1 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Hmgn3Q9DCB1 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.5■□□□□ 0.55
Hmgn3Q9DCB1 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.5■□□□□ 0.55
Hmgn3Q9DCB1 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hmgn3Q9DCB1 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hmgn3Q9DCB1 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hmgn3Q9DCB1 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hmgn3Q9DCB1 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hmgn3Q9DCB1 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hmgn3Q9DCB1 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hmgn3Q9DCB1 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hmgn3Q9DCB1 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Hmgn3Q9DCB1 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hmgn3Q9DCB1 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hmgn3Q9DCB1 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hmgn3Q9DCB1 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Hmgn3Q9DCB1 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC18.48■□□□□ 0.55
Hmgn3Q9DCB1 Gm14523-201ENSMUST00000117260 558 ntBASIC18.48■□□□□ 0.55
Hmgn3Q9DCB1 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hmgn3Q9DCB1 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hmgn3Q9DCB1 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hmgn3Q9DCB1 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Hmgn3Q9DCB1 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Hmgn3Q9DCB1 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hmgn3Q9DCB1 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hmgn3Q9DCB1 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hmgn3Q9DCB1 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hmgn3Q9DCB1 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Hmgn3Q9DCB1 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.47■□□□□ 0.55
Hmgn3Q9DCB1 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hmgn3Q9DCB1 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Hmgn3Q9DCB1 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Hmgn3Q9DCB1 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC18.46■□□□□ 0.55
Hmgn3Q9DCB1 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Hmgn3Q9DCB1 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Hmgn3Q9DCB1 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hmgn3Q9DCB1 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Hmgn3Q9DCB1 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
Hmgn3Q9DCB1 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hmgn3Q9DCB1 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hmgn3Q9DCB1 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hmgn3Q9DCB1 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hmgn3Q9DCB1 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hmgn3Q9DCB1 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hmgn3Q9DCB1 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hmgn3Q9DCB1 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Hmgn3Q9DCB1 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Hmgn3Q9DCB1 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Hmgn3Q9DCB1 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.45■□□□□ 0.54
Hmgn3Q9DCB1 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Hmgn3Q9DCB1 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hmgn3Q9DCB1 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.44■□□□□ 0.54
Hmgn3Q9DCB1 Rarb-207ENSMUST00000225921 2756 ntBASIC18.44■□□□□ 0.54
Hmgn3Q9DCB1 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Hmgn3Q9DCB1 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Hmgn3Q9DCB1 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.44■□□□□ 0.54
Hmgn3Q9DCB1 Gm7332-201ENSMUST00000118351 454 ntBASIC18.44■□□□□ 0.54
Hmgn3Q9DCB1 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC18.44■□□□□ 0.54
Hmgn3Q9DCB1 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC18.44■□□□□ 0.54
Hmgn3Q9DCB1 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hmgn3Q9DCB1 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hmgn3Q9DCB1 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Hmgn3Q9DCB1 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hmgn3Q9DCB1 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hmgn3Q9DCB1 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hmgn3Q9DCB1 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Hmgn3Q9DCB1 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hmgn3Q9DCB1 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Hmgn3Q9DCB1 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Hmgn3Q9DCB1 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Hmgn3Q9DCB1 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hmgn3Q9DCB1 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Hmgn3Q9DCB1 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC18.43■□□□□ 0.54
Hmgn3Q9DCB1 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Hmgn3Q9DCB1 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hmgn3Q9DCB1 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.43■□□□□ 0.54
Hmgn3Q9DCB1 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hmgn3Q9DCB1 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
Hmgn3Q9DCB1 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.42■□□□□ 0.54
Hmgn3Q9DCB1 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hmgn3Q9DCB1 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hmgn3Q9DCB1 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC18.42■□□□□ 0.54
Hmgn3Q9DCB1 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hmgn3Q9DCB1 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Hmgn3Q9DCB1 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hmgn3Q9DCB1 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hmgn3Q9DCB1 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hmgn3Q9DCB1 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Hmgn3Q9DCB1 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hmgn3Q9DCB1 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Hmgn3Q9DCB1 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Hmgn3Q9DCB1 BC021767-201ENSMUST00000126387 1716 ntBASIC18.41■□□□□ 0.54
Hmgn3Q9DCB1 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Hmgn3Q9DCB1 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hmgn3Q9DCB1 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hmgn3Q9DCB1 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hmgn3Q9DCB1 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hmgn3Q9DCB1 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms