Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chmp2aQ9DB34 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chmp2aQ9DB34 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.54■□□□□ 0.88
Chmp2aQ9DB34 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chmp2aQ9DB34 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chmp2aQ9DB34 Gm10209-201ENSMUST00000203397 1607 ntBASIC20.53■□□□□ 0.88
Chmp2aQ9DB34 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.53■□□□□ 0.88
Chmp2aQ9DB34 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chmp2aQ9DB34 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Chmp2aQ9DB34 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.53■□□□□ 0.88
Chmp2aQ9DB34 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Chmp2aQ9DB34 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Chmp2aQ9DB34 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Chmp2aQ9DB34 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Chmp2aQ9DB34 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.53■□□□□ 0.88
Chmp2aQ9DB34 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chmp2aQ9DB34 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chmp2aQ9DB34 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
Chmp2aQ9DB34 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Chmp2aQ9DB34 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Chmp2aQ9DB34 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Chmp2aQ9DB34 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Chmp2aQ9DB34 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chmp2aQ9DB34 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.51■□□□□ 0.87
Chmp2aQ9DB34 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chmp2aQ9DB34 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
Chmp2aQ9DB34 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Chmp2aQ9DB34 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chmp2aQ9DB34 Gm12251-201ENSMUST00000117893 792 ntBASIC20.51■□□□□ 0.87
Chmp2aQ9DB34 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chmp2aQ9DB34 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Chmp2aQ9DB34 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Chmp2aQ9DB34 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.51■□□□□ 0.87
Chmp2aQ9DB34 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chmp2aQ9DB34 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chmp2aQ9DB34 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chmp2aQ9DB34 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
Chmp2aQ9DB34 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chmp2aQ9DB34 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chmp2aQ9DB34 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chmp2aQ9DB34 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Chmp2aQ9DB34 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Chmp2aQ9DB34 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chmp2aQ9DB34 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chmp2aQ9DB34 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Chmp2aQ9DB34 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Chmp2aQ9DB34 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Chmp2aQ9DB34 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Chmp2aQ9DB34 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Chmp2aQ9DB34 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Chmp2aQ9DB34 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.49■□□□□ 0.87
Chmp2aQ9DB34 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Chmp2aQ9DB34 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Chmp2aQ9DB34 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Chmp2aQ9DB34 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Chmp2aQ9DB34 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Chmp2aQ9DB34 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.49■□□□□ 0.87
Chmp2aQ9DB34 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Chmp2aQ9DB34 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Chmp2aQ9DB34 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Chmp2aQ9DB34 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Chmp2aQ9DB34 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Chmp2aQ9DB34 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Chmp2aQ9DB34 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Chmp2aQ9DB34 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.48■□□□□ 0.87
Chmp2aQ9DB34 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.48■□□□□ 0.87
Chmp2aQ9DB34 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Chmp2aQ9DB34 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.48■□□□□ 0.87
Chmp2aQ9DB34 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Chmp2aQ9DB34 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Chmp2aQ9DB34 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Chmp2aQ9DB34 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC20.47■□□□□ 0.87
Chmp2aQ9DB34 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Chmp2aQ9DB34 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Chmp2aQ9DB34 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Chmp2aQ9DB34 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.47■□□□□ 0.87
Chmp2aQ9DB34 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC20.47■□□□□ 0.87
Chmp2aQ9DB34 Gm8493-201ENSMUST00000196881 489 ntBASIC20.47■□□□□ 0.87
Chmp2aQ9DB34 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Chmp2aQ9DB34 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Chmp2aQ9DB34 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Chmp2aQ9DB34 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Chmp2aQ9DB34 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.47■□□□□ 0.87
Chmp2aQ9DB34 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
Chmp2aQ9DB34 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.47■□□□□ 0.87
Chmp2aQ9DB34 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
Chmp2aQ9DB34 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Chmp2aQ9DB34 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Chmp2aQ9DB34 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Chmp2aQ9DB34 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Chmp2aQ9DB34 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Chmp2aQ9DB34 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Chmp2aQ9DB34 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Chmp2aQ9DB34 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Chmp2aQ9DB34 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Chmp2aQ9DB34 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Chmp2aQ9DB34 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Chmp2aQ9DB34 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Chmp2aQ9DB34 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.45■□□□□ 0.86
Chmp2aQ9DB34 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.45■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms