Protein–RNA interactions for Protein: Q9D9V4

Rsph9, Radial spoke head protein 9 homolog, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph9Q9D9V4 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rsph9Q9D9V4 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Rsph9Q9D9V4 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rsph9Q9D9V4 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC19.32■□□□□ 0.68
Rsph9Q9D9V4 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.32■□□□□ 0.68
Rsph9Q9D9V4 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.32■□□□□ 0.68
Rsph9Q9D9V4 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rsph9Q9D9V4 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Rsph9Q9D9V4 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Rsph9Q9D9V4 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.31■□□□□ 0.68
Rsph9Q9D9V4 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rsph9Q9D9V4 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Rsph9Q9D9V4 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Rsph9Q9D9V4 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
Rsph9Q9D9V4 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Rsph9Q9D9V4 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rsph9Q9D9V4 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rsph9Q9D9V4 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
Rsph9Q9D9V4 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
Rsph9Q9D9V4 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rsph9Q9D9V4 Gm11421-201ENSMUST00000122124 294 ntBASIC19.3■□□□□ 0.68
Rsph9Q9D9V4 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rsph9Q9D9V4 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rsph9Q9D9V4 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.3■□□□□ 0.68
Rsph9Q9D9V4 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rsph9Q9D9V4 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rsph9Q9D9V4 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Rsph9Q9D9V4 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.3■□□□□ 0.68
Rsph9Q9D9V4 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rsph9Q9D9V4 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rsph9Q9D9V4 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rsph9Q9D9V4 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rsph9Q9D9V4 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.29■□□□□ 0.68
Rsph9Q9D9V4 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Rsph9Q9D9V4 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.29■□□□□ 0.68
Rsph9Q9D9V4 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.29■□□□□ 0.68
Rsph9Q9D9V4 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Rsph9Q9D9V4 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rsph9Q9D9V4 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rsph9Q9D9V4 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rsph9Q9D9V4 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Rsph9Q9D9V4 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Rsph9Q9D9V4 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC19.28■□□□□ 0.68
Rsph9Q9D9V4 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rsph9Q9D9V4 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rsph9Q9D9V4 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.28■□□□□ 0.68
Rsph9Q9D9V4 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rsph9Q9D9V4 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rsph9Q9D9V4 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rsph9Q9D9V4 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rsph9Q9D9V4 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rsph9Q9D9V4 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Rsph9Q9D9V4 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rsph9Q9D9V4 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.27■□□□□ 0.68
Rsph9Q9D9V4 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.27■□□□□ 0.68
Rsph9Q9D9V4 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rsph9Q9D9V4 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.27■□□□□ 0.68
Rsph9Q9D9V4 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rsph9Q9D9V4 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rsph9Q9D9V4 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.26■□□□□ 0.67
Rsph9Q9D9V4 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.26■□□□□ 0.67
Rsph9Q9D9V4 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rsph9Q9D9V4 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rsph9Q9D9V4 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Rsph9Q9D9V4 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rsph9Q9D9V4 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rsph9Q9D9V4 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rsph9Q9D9V4 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.26■□□□□ 0.67
Rsph9Q9D9V4 Gm10129-202ENSMUST00000193100 1316 ntBASIC19.25■□□□□ 0.67
Rsph9Q9D9V4 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rsph9Q9D9V4 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rsph9Q9D9V4 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rsph9Q9D9V4 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rsph9Q9D9V4 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rsph9Q9D9V4 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rsph9Q9D9V4 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rsph9Q9D9V4 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rsph9Q9D9V4 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rsph9Q9D9V4 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rsph9Q9D9V4 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rsph9Q9D9V4 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rsph9Q9D9V4 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rsph9Q9D9V4 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rsph9Q9D9V4 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rsph9Q9D9V4 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Rsph9Q9D9V4 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rsph9Q9D9V4 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.24■□□□□ 0.67
Rsph9Q9D9V4 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.24■□□□□ 0.67
Rsph9Q9D9V4 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.24■□□□□ 0.67
Rsph9Q9D9V4 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rsph9Q9D9V4 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rsph9Q9D9V4 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rsph9Q9D9V4 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rsph9Q9D9V4 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rsph9Q9D9V4 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.23■□□□□ 0.67
Rsph9Q9D9V4 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rsph9Q9D9V4 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rsph9Q9D9V4 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rsph9Q9D9V4 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.23■□□□□ 0.67
Rsph9Q9D9V4 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms