Protein–RNA interactions for Protein: Q9D995

Cntd1, Cyclin N-terminal domain-containing protein 1, mousemouse

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntd1Q9D995 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cntd1Q9D995 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cntd1Q9D995 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cntd1Q9D995 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cntd1Q9D995 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cntd1Q9D995 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC18.69■□□□□ 0.58
Cntd1Q9D995 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC18.69■□□□□ 0.58
Cntd1Q9D995 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.69■□□□□ 0.58
Cntd1Q9D995 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC18.69■□□□□ 0.58
Cntd1Q9D995 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.69■□□□□ 0.58
Cntd1Q9D995 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cntd1Q9D995 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cntd1Q9D995 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cntd1Q9D995 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC18.68■□□□□ 0.58
Cntd1Q9D995 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cntd1Q9D995 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cntd1Q9D995 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cntd1Q9D995 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cntd1Q9D995 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cntd1Q9D995 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cntd1Q9D995 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cntd1Q9D995 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cntd1Q9D995 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cntd1Q9D995 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.67■□□□□ 0.58
Cntd1Q9D995 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.67■□□□□ 0.58
Cntd1Q9D995 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cntd1Q9D995 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC18.67■□□□□ 0.58
Cntd1Q9D995 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.67■□□□□ 0.58
Cntd1Q9D995 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cntd1Q9D995 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.66■□□□□ 0.58
Cntd1Q9D995 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cntd1Q9D995 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cntd1Q9D995 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cntd1Q9D995 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cntd1Q9D995 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Cntd1Q9D995 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC18.66■□□□□ 0.58
Cntd1Q9D995 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cntd1Q9D995 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cntd1Q9D995 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cntd1Q9D995 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.65■□□□□ 0.58
Cntd1Q9D995 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC18.65■□□□□ 0.58
Cntd1Q9D995 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.65■□□□□ 0.58
Cntd1Q9D995 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Cntd1Q9D995 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cntd1Q9D995 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cntd1Q9D995 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cntd1Q9D995 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
Cntd1Q9D995 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cntd1Q9D995 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cntd1Q9D995 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cntd1Q9D995 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Cntd1Q9D995 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
Cntd1Q9D995 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cntd1Q9D995 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cntd1Q9D995 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cntd1Q9D995 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cntd1Q9D995 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Cntd1Q9D995 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cntd1Q9D995 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.64■□□□□ 0.57
Cntd1Q9D995 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cntd1Q9D995 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
Cntd1Q9D995 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cntd1Q9D995 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cntd1Q9D995 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cntd1Q9D995 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.63■□□□□ 0.57
Cntd1Q9D995 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cntd1Q9D995 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cntd1Q9D995 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cntd1Q9D995 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cntd1Q9D995 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Cntd1Q9D995 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC18.63■□□□□ 0.57
Cntd1Q9D995 Gm40881-201ENSMUST00000223397 166 ntBASIC18.63■□□□□ 0.57
Cntd1Q9D995 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cntd1Q9D995 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cntd1Q9D995 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cntd1Q9D995 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cntd1Q9D995 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cntd1Q9D995 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cntd1Q9D995 Gm7143-201ENSMUST00000222811 859 ntBASIC18.62■□□□□ 0.57
Cntd1Q9D995 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cntd1Q9D995 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cntd1Q9D995 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cntd1Q9D995 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cntd1Q9D995 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cntd1Q9D995 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
Cntd1Q9D995 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Cntd1Q9D995 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cntd1Q9D995 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
Cntd1Q9D995 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cntd1Q9D995 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cntd1Q9D995 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cntd1Q9D995 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
Cntd1Q9D995 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cntd1Q9D995 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cntd1Q9D995 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cntd1Q9D995 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cntd1Q9D995 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cntd1Q9D995 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Cntd1Q9D995 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cntd1Q9D995 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms