Protein–RNA interactions for Protein: Q9D8B4

Ndufa11, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11, mousemouse

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufa11Q9D8B4 Gm6365-201ENSMUST00000054711 744 ntBASIC17.16■□□□□ 0.34
Ndufa11Q9D8B4 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.16■□□□□ 0.34
Ndufa11Q9D8B4 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Ndufa11Q9D8B4 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ndufa11Q9D8B4 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ndufa11Q9D8B4 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ndufa11Q9D8B4 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ndufa11Q9D8B4 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ndufa11Q9D8B4 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ndufa11Q9D8B4 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ndufa11Q9D8B4 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Ndufa11Q9D8B4 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.15■□□□□ 0.34
Ndufa11Q9D8B4 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.15■□□□□ 0.34
Ndufa11Q9D8B4 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ndufa11Q9D8B4 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ndufa11Q9D8B4 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ndufa11Q9D8B4 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ndufa11Q9D8B4 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ndufa11Q9D8B4 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ndufa11Q9D8B4 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ndufa11Q9D8B4 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ndufa11Q9D8B4 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Ndufa11Q9D8B4 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ndufa11Q9D8B4 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.14■□□□□ 0.33
Ndufa11Q9D8B4 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ndufa11Q9D8B4 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.14■□□□□ 0.33
Ndufa11Q9D8B4 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.14■□□□□ 0.33
Ndufa11Q9D8B4 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.14■□□□□ 0.33
Ndufa11Q9D8B4 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ndufa11Q9D8B4 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ndufa11Q9D8B4 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ndufa11Q9D8B4 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.13■□□□□ 0.33
Ndufa11Q9D8B4 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ndufa11Q9D8B4 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Ndufa11Q9D8B4 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ndufa11Q9D8B4 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ndufa11Q9D8B4 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ndufa11Q9D8B4 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ndufa11Q9D8B4 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Ndufa11Q9D8B4 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ndufa11Q9D8B4 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.13■□□□□ 0.33
Ndufa11Q9D8B4 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ndufa11Q9D8B4 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Ndufa11Q9D8B4 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ndufa11Q9D8B4 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ndufa11Q9D8B4 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ndufa11Q9D8B4 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ndufa11Q9D8B4 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ndufa11Q9D8B4 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ndufa11Q9D8B4 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ndufa11Q9D8B4 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ndufa11Q9D8B4 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ndufa11Q9D8B4 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ndufa11Q9D8B4 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ndufa11Q9D8B4 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
Ndufa11Q9D8B4 Gm13168-201ENSMUST00000121771 632 ntBASIC17.12■□□□□ 0.33
Ndufa11Q9D8B4 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ndufa11Q9D8B4 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC17.12■□□□□ 0.33
Ndufa11Q9D8B4 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC17.11■□□□□ 0.33
Ndufa11Q9D8B4 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ndufa11Q9D8B4 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ndufa11Q9D8B4 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ndufa11Q9D8B4 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Ndufa11Q9D8B4 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ndufa11Q9D8B4 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.11■□□□□ 0.33
Ndufa11Q9D8B4 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Ndufa11Q9D8B4 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ndufa11Q9D8B4 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Ndufa11Q9D8B4 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ndufa11Q9D8B4 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ndufa11Q9D8B4 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Ndufa11Q9D8B4 Gm6211-202ENSMUST00000167849 925 ntBASIC17.1■□□□□ 0.33
Ndufa11Q9D8B4 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.1■□□□□ 0.33
Ndufa11Q9D8B4 Gm38205-201ENSMUST00000192243 258 ntBASIC17.1■□□□□ 0.33
Ndufa11Q9D8B4 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Ndufa11Q9D8B4 Gm20049-201ENSMUST00000219950 730 ntBASIC17.1■□□□□ 0.33
Ndufa11Q9D8B4 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ndufa11Q9D8B4 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ndufa11Q9D8B4 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ndufa11Q9D8B4 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ndufa11Q9D8B4 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ndufa11Q9D8B4 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ndufa11Q9D8B4 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.09■□□□□ 0.33
Ndufa11Q9D8B4 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ndufa11Q9D8B4 Gm6420-201ENSMUST00000193885 723 ntBASIC17.09■□□□□ 0.33
Ndufa11Q9D8B4 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ndufa11Q9D8B4 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.09■□□□□ 0.33
Ndufa11Q9D8B4 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Ndufa11Q9D8B4 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ndufa11Q9D8B4 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ndufa11Q9D8B4 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ndufa11Q9D8B4 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ndufa11Q9D8B4 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Ndufa11Q9D8B4 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ndufa11Q9D8B4 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ndufa11Q9D8B4 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Ndufa11Q9D8B4 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.08■□□□□ 0.32
Ndufa11Q9D8B4 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ndufa11Q9D8B4 Gm10812-201ENSMUST00000099864 546 ntBASIC17.08■□□□□ 0.32
Ndufa11Q9D8B4 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms