Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Trim42Q9D2H5 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim42Q9D2H5 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim42Q9D2H5 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim42Q9D2H5 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim42Q9D2H5 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim42Q9D2H5 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Trim42Q9D2H5 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Trim42Q9D2H5 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim42Q9D2H5 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim42Q9D2H5 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.61■□□□□ 0.73
Trim42Q9D2H5 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim42Q9D2H5 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Trim42Q9D2H5 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Trim42Q9D2H5 Gm42900-201ENSMUST00000197184 2167 ntBASIC19.6■□□□□ 0.73
Trim42Q9D2H5 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Trim42Q9D2H5 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Trim42Q9D2H5 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.6■□□□□ 0.73
Trim42Q9D2H5 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC19.6■□□□□ 0.73
Trim42Q9D2H5 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Trim42Q9D2H5 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim42Q9D2H5 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim42Q9D2H5 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim42Q9D2H5 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Trim42Q9D2H5 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim42Q9D2H5 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim42Q9D2H5 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim42Q9D2H5 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim42Q9D2H5 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Trim42Q9D2H5 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.59■□□□□ 0.73
Trim42Q9D2H5 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC19.59■□□□□ 0.73
Trim42Q9D2H5 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19.59■□□□□ 0.73
Trim42Q9D2H5 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim42Q9D2H5 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Trim42Q9D2H5 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim42Q9D2H5 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
Trim42Q9D2H5 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Trim42Q9D2H5 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.59■□□□□ 0.73
Trim42Q9D2H5 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trim42Q9D2H5 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trim42Q9D2H5 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trim42Q9D2H5 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC19.58■□□□□ 0.72
Trim42Q9D2H5 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim42Q9D2H5 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim42Q9D2H5 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim42Q9D2H5 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim42Q9D2H5 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Trim42Q9D2H5 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim42Q9D2H5 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.58■□□□□ 0.72
Trim42Q9D2H5 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Trim42Q9D2H5 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Trim42Q9D2H5 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.57■□□□□ 0.72
Trim42Q9D2H5 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim42Q9D2H5 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim42Q9D2H5 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim42Q9D2H5 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim42Q9D2H5 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim42Q9D2H5 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim42Q9D2H5 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim42Q9D2H5 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim42Q9D2H5 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim42Q9D2H5 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim42Q9D2H5 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trim42Q9D2H5 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim42Q9D2H5 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trim42Q9D2H5 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim42Q9D2H5 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim42Q9D2H5 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trim42Q9D2H5 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Trim42Q9D2H5 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trim42Q9D2H5 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.56■□□□□ 0.72
Trim42Q9D2H5 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim42Q9D2H5 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim42Q9D2H5 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim42Q9D2H5 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim42Q9D2H5 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Trim42Q9D2H5 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim42Q9D2H5 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Trim42Q9D2H5 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim42Q9D2H5 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Trim42Q9D2H5 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim42Q9D2H5 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.55■□□□□ 0.72
Trim42Q9D2H5 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim42Q9D2H5 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim42Q9D2H5 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Trim42Q9D2H5 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Trim42Q9D2H5 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Trim42Q9D2H5 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim42Q9D2H5 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Trim42Q9D2H5 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Trim42Q9D2H5 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim42Q9D2H5 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Trim42Q9D2H5 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Trim42Q9D2H5 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Trim42Q9D2H5 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim42Q9D2H5 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Trim42Q9D2H5 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Trim42Q9D2H5 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Trim42Q9D2H5 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim42Q9D2H5 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms