Protein–RNA interactions for Protein: Q9D1D6

Cthrc1, Collagen triple helix repeat-containing protein 1, mousemouse

Predictions only

Length 245 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cthrc1Q9D1D6 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cthrc1Q9D1D6 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cthrc1Q9D1D6 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Cthrc1Q9D1D6 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cthrc1Q9D1D6 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cthrc1Q9D1D6 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Cthrc1Q9D1D6 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Cthrc1Q9D1D6 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.38■□□□□ 0.53
Cthrc1Q9D1D6 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Cthrc1Q9D1D6 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cthrc1Q9D1D6 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.37■□□□□ 0.53
Cthrc1Q9D1D6 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cthrc1Q9D1D6 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cthrc1Q9D1D6 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cthrc1Q9D1D6 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cthrc1Q9D1D6 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Cthrc1Q9D1D6 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cthrc1Q9D1D6 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cthrc1Q9D1D6 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cthrc1Q9D1D6 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Cthrc1Q9D1D6 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cthrc1Q9D1D6 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cthrc1Q9D1D6 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cthrc1Q9D1D6 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
Cthrc1Q9D1D6 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cthrc1Q9D1D6 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cthrc1Q9D1D6 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cthrc1Q9D1D6 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Cthrc1Q9D1D6 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.35■□□□□ 0.53
Cthrc1Q9D1D6 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Cthrc1Q9D1D6 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cthrc1Q9D1D6 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cthrc1Q9D1D6 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.35■□□□□ 0.53
Cthrc1Q9D1D6 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cthrc1Q9D1D6 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cthrc1Q9D1D6 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cthrc1Q9D1D6 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cthrc1Q9D1D6 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cthrc1Q9D1D6 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Cthrc1Q9D1D6 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cthrc1Q9D1D6 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cthrc1Q9D1D6 Mir7075-201ENSMUST00000184187 82 ntBASIC18.34■□□□□ 0.53
Cthrc1Q9D1D6 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cthrc1Q9D1D6 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Cthrc1Q9D1D6 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Cthrc1Q9D1D6 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cthrc1Q9D1D6 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cthrc1Q9D1D6 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Cthrc1Q9D1D6 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Cthrc1Q9D1D6 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Cthrc1Q9D1D6 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cthrc1Q9D1D6 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cthrc1Q9D1D6 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cthrc1Q9D1D6 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cthrc1Q9D1D6 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cthrc1Q9D1D6 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cthrc1Q9D1D6 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cthrc1Q9D1D6 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cthrc1Q9D1D6 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cthrc1Q9D1D6 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cthrc1Q9D1D6 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.32■□□□□ 0.52
Cthrc1Q9D1D6 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.32■□□□□ 0.52
Cthrc1Q9D1D6 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cthrc1Q9D1D6 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.32■□□□□ 0.52
Cthrc1Q9D1D6 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cthrc1Q9D1D6 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
Cthrc1Q9D1D6 Spcs1-204ENSMUST00000226782 949 ntBASIC18.32■□□□□ 0.52
Cthrc1Q9D1D6 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cthrc1Q9D1D6 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cthrc1Q9D1D6 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.32■□□□□ 0.52
Cthrc1Q9D1D6 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.32■□□□□ 0.52
Cthrc1Q9D1D6 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cthrc1Q9D1D6 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Cthrc1Q9D1D6 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cthrc1Q9D1D6 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cthrc1Q9D1D6 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.31■□□□□ 0.52
Cthrc1Q9D1D6 Gm2011-201ENSMUST00000203124 1263 ntBASIC18.31■□□□□ 0.52
Cthrc1Q9D1D6 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cthrc1Q9D1D6 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cthrc1Q9D1D6 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
Cthrc1Q9D1D6 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cthrc1Q9D1D6 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cthrc1Q9D1D6 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cthrc1Q9D1D6 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
Cthrc1Q9D1D6 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Cthrc1Q9D1D6 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cthrc1Q9D1D6 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cthrc1Q9D1D6 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.3■□□□□ 0.52
Cthrc1Q9D1D6 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Cthrc1Q9D1D6 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Cthrc1Q9D1D6 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
Cthrc1Q9D1D6 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cthrc1Q9D1D6 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Cthrc1Q9D1D6 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cthrc1Q9D1D6 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cthrc1Q9D1D6 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cthrc1Q9D1D6 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cthrc1Q9D1D6 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Cthrc1Q9D1D6 Gm12251-201ENSMUST00000117893 792 ntBASIC18.29■□□□□ 0.52
Cthrc1Q9D1D6 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms