Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Upk1aQ9D132 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Upk1aQ9D132 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Upk1aQ9D132 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Upk1aQ9D132 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Upk1aQ9D132 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Upk1aQ9D132 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Upk1aQ9D132 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Upk1aQ9D132 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Upk1aQ9D132 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Upk1aQ9D132 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Upk1aQ9D132 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Upk1aQ9D132 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.73■□□□□ 0.59
Upk1aQ9D132 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.73■□□□□ 0.59
Upk1aQ9D132 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Upk1aQ9D132 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Upk1aQ9D132 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Upk1aQ9D132 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC18.72■□□□□ 0.59
Upk1aQ9D132 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Upk1aQ9D132 Gm7143-201ENSMUST00000222811 859 ntBASIC18.72■□□□□ 0.59
Upk1aQ9D132 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Upk1aQ9D132 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Upk1aQ9D132 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Upk1aQ9D132 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Upk1aQ9D132 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Upk1aQ9D132 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Upk1aQ9D132 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Upk1aQ9D132 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Upk1aQ9D132 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Upk1aQ9D132 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Upk1aQ9D132 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.71■□□□□ 0.59
Upk1aQ9D132 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Upk1aQ9D132 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Upk1aQ9D132 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Upk1aQ9D132 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
Upk1aQ9D132 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Upk1aQ9D132 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Upk1aQ9D132 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
Upk1aQ9D132 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Upk1aQ9D132 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Upk1aQ9D132 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Upk1aQ9D132 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Upk1aQ9D132 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
Upk1aQ9D132 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Upk1aQ9D132 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Upk1aQ9D132 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Upk1aQ9D132 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Upk1aQ9D132 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Upk1aQ9D132 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Upk1aQ9D132 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Upk1aQ9D132 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Upk1aQ9D132 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Upk1aQ9D132 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Upk1aQ9D132 Gm10399-202ENSMUST00000202768 748 ntBASIC18.69■□□□□ 0.58
Upk1aQ9D132 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC18.69■□□□□ 0.58
Upk1aQ9D132 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Upk1aQ9D132 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Upk1aQ9D132 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Upk1aQ9D132 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Upk1aQ9D132 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Upk1aQ9D132 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Upk1aQ9D132 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Upk1aQ9D132 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Upk1aQ9D132 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Upk1aQ9D132 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Upk1aQ9D132 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Upk1aQ9D132 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Upk1aQ9D132 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.68■□□□□ 0.58
Upk1aQ9D132 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Upk1aQ9D132 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Upk1aQ9D132 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Upk1aQ9D132 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.68■□□□□ 0.58
Upk1aQ9D132 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Upk1aQ9D132 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Upk1aQ9D132 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Upk1aQ9D132 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Upk1aQ9D132 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Upk1aQ9D132 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
Upk1aQ9D132 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Upk1aQ9D132 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Upk1aQ9D132 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Upk1aQ9D132 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Upk1aQ9D132 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Upk1aQ9D132 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Upk1aQ9D132 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Upk1aQ9D132 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Upk1aQ9D132 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Upk1aQ9D132 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Upk1aQ9D132 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
Upk1aQ9D132 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
Upk1aQ9D132 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Upk1aQ9D132 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Upk1aQ9D132 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Upk1aQ9D132 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Upk1aQ9D132 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Upk1aQ9D132 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Upk1aQ9D132 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Upk1aQ9D132 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.66■□□□□ 0.58
Upk1aQ9D132 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Upk1aQ9D132 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms